RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	WHAMM	Q8TF30	809 aa		12.29	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	BHMT	Q93088	406 aa		12.29	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	OTUB2	Q96DC9	234 aa		12.29	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	SPACA7	Q96KW9	195 aa		12.29	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	SPATA32	Q96LK8	384 aa		12.29	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	FBXO44	Q9H4M3	255 aa		12.29	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	POLM	Q9NP87	494 aa	Predicted RBP	12.29	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	TLR8	Q9NR97	1041 aa	Known RBP	12.29	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	DNAJC17	Q9NVM6	304 aa	Known RBP	12.29	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	OSER1	Q9NX31	292 aa		12.29	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	DEC1	Q9P2X7	70 aa		12.29	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	MBD1	Q9UIS9	605 aa	Predicted RBP	12.29	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	ANGPTL2	Q9UKU9	493 aa		12.29	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114		A0A1W2PQH9	124 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	FAM92A	A1XBS5	289 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	HOXC11	O43248	304 aa	Predicted RBP	12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	ACO1	P21399	889 aa	Known RBP	12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	NR2F2	P24468	414 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	PML	P29590	882 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	P2RY2	P41231	377 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	PTGER3	P43115	390 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	SYK	P43405	635 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	NDUFA8	P51970	172 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	IRX4	P78413	519 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	PPP3CA	Q08209	521 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	EGFLAM	Q63HQ2	1017 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	CLEC20A	Q6ZU45	233 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	LPCAT2	Q7L5N7	544 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	C11orf74	Q86VG3	221 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	UNC93A	Q86WB7	457 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	MIB1	Q86YT6	1006 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	TERB1	Q8NA31	727 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	TAS1R2	Q8TE23	839 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	TAF4B	Q92750	862 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	CYFIP2	Q96F07	1278 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	EEF2KMT	Q96G04	330 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	KLF16	Q9BXK1	252 aa	Predicted RBP	12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	NMUR1	Q9HB89	426 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	CSNK1G1	Q9HCP0	422 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	FSCN3	Q9NQT6	498 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	COMMD8	Q9NX08	183 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	HCN2	Q9UL51	889 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	HPSE	Q9Y251	543 aa		12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	MYO18A	Q92614	2054 aa	Known RBP	12.28	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	EPG5	Q9HCE0	2579 aa		12.27	□□□□□ -0.44
CDK5RAP3-223	ENST00000582114	MAP1B	P46821	2468 aa	Known RBP	12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114		A0A0A0MRY4	1105 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	HHLA1	C9JL84	531 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	GREM1	O60565	184 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	RARG	P13631	454 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	HOXB2	P14652	356 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	TYR	P14679	529 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	ATP5C1	P36542	298 aa	Known RBP	12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	MAPK8	P45983	427 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	KRT85	P78386	507 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	MAP7D1	Q3KQU3	841 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	HSF5	Q4G112	596 aa	Predicted RBP	12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	ZNF394	Q53GI3	561 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	TRIM61	Q5EBN2	209 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	SH3PXD2A	Q5TCZ1	1133 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	DAB2IP	Q5VWQ8	1189 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	GRAMD4	Q6IC98	578 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	TOGARAM2	Q6ZUX3	1019 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	FAM186B	Q8IYM0	893 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	ACOX2	Q99424	681 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	BBS2	Q9BXC9	721 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	NT5C1A	Q9BXI3	368 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	IMPG2	Q9BZV3	1241 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	TMEM9B	Q9NQ34	198 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	TMEM74B	Q9NUR3	256 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	PLK2	Q9NYY3	685 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	USP25	Q9UHP3	1055 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	SCML2	Q9UQR0	700 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	TRAF3IP3	Q9Y228	551 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	ZDHHC9	Q9Y397	364 aa		12.27	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	CDX4	O14627	284 aa	Predicted RBP	12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	IKBKB	O14920	756 aa		12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	RHOBTB3	O94955	611 aa		12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	HMBS	P08397	361 aa		12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	KRT13	P13646	458 aa		12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	GABRG2	P18507	467 aa		12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	TRIM21	P19474	475 aa	Known RBP	12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	SPINK2	P20155	84 aa		12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	ITPKA	P23677	461 aa		12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	INCA1	Q0VD86	236 aa		12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	FOXC1	Q12948	553 aa		12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	C10orf120	Q5SQS8	335 aa		12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	LYSMD4	Q5XG99	296 aa		12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	HTR3D	Q70Z44	454 aa		12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	TRMT11	Q7Z4G4	463 aa	Known RBP	12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	SMYD4	Q8IYR2	804 aa	Predicted RBP	12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	TMEM174	Q8WUU8	243 aa		12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	CCDC47	Q96A33	483 aa	Known RBP	12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	HNRNPAB	Q99729	332 aa	Known RBP	12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	NIF3L1	Q9GZT8	377 aa		12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	SLC6A17	Q9H1V8	727 aa		12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	GOLPH3L	Q9H4A5	285 aa		12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	CYLD	Q9NQC7	956 aa		12.26	□□□□□ -0.45
CDK5RAP3-223	ENST00000582114	CALCOCO1	Q9P1Z2	691 aa		12.26	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms