RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	OPRD1	P41143	372 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	GRIA2	P42262	883 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	TNFRSF4	P43489	277 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	MRPS21	P82921	87 aa	Known RBP	13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	CAMK4	Q16566	473 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	MEA1	Q16626	185 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	BTBD8	Q5XKL5	378 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	LAIR1	Q6GTX8	287 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	LCLAT1	Q6UWP7	414 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	PIGZ	Q86VD9	579 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	PPM1K	Q8N3J5	372 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	KCTD13	Q8WZ19	329 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	PNKP	Q96T60	521 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	DCLK3	Q9C098	648 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	CLSTN2	Q9H4D0	955 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SPHK2	Q9NRA0	654 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	OLA1	Q9NTK5	396 aa	Known RBP	13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	WDR35	Q9P2L0	1181 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	DACH1	Q9UI36	760 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	NAGPA	Q9UK23	515 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	TSPAN16	Q9UKR8	245 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SMG5	Q9UPR3	1016 aa	Known RBP	13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	CNTN6	Q9UQ52	1028 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	MYO16	Q9Y6X6	1858 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708		A0A1W2PQH9	124 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	GTPBP10	A4D1E9	387 aa	Known RBP	13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708		O00370	1275 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	FOXD2	O60548	495 aa	Predicted RBP	13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	GREM1	O60565	184 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	LRP3	O75074	770 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	CD19	P15391	556 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	ERCC5	P28715	1186 aa	Predicted RBP	13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	CNGA2	Q16280	664 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	GOLGA7B	Q2TAP0	167 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	C10orf120	Q5SQS8	335 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	LY6G5C	Q5SRR4	150 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	TMEM270	Q6UE05	265 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SCD5	Q86SK9	330 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	TTC30A	Q86WT1	665 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	NMUR1	Q9HB89	426 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	LRRC4	Q9HBW1	653 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	CNGB3	Q9NQW8	809 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	OSER1	Q9NX31	292 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	MARK1	Q9P0L2	795 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	NCDN	Q9UBB6	729 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	EBF1	Q9UH73	591 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	STRIP2	Q9ULQ0	834 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	DMD	P11532	3685 aa		13.23	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	KAT7	O95251	611 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	TBX18	O95935	607 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	APOD	P05090	189 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	FNTB	P49356	437 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	PGF	P49763	221 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	TKTL1	P51854	596 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	STX17	P56962	302 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	PDE4C	Q08493	712 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	LRMP	Q12912	555 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	PKDCC	Q504Y2	493 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708		Q6ZNB5	142 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	FAM114A1	Q8IWE2	563 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	BBS7	Q8IWZ6	715 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	ETFBKMT	Q8IXQ9	262 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	RPLP0P6	Q8NHW5	317 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	USP33	Q8TEY7	942 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	IRGQ	Q8WZA9	623 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	EZH1	Q92800	747 aa	Predicted RBP	13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	HSFY1	Q96LI6	401 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	DEC1	Q9P2X7	70 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	GMEB2	Q9UKD1	530 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	PCDHB4	Q9Y5E5	795 aa		13.22	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708		K7EQS6	105 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	HR	O43593	1189 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	APBB3	O95704	486 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	RET	P07949	1114 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SDHB	P21912	280 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	CHKA	P35790	457 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	ZNF132	P52740	706 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	YWHAG	P61981	247 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SIM2	Q14190	667 aa	Predicted RBP	13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	E2F5	Q15329	346 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	PKN3	Q6P5Z2	889 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	TRMT11	Q7Z4G4	463 aa	Known RBP	13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	C11orf74	Q86VG3	221 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SIX6OS1	Q8N1H7	587 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SLC35F5	Q8WV83	523 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	LOXL4	Q96JB6	756 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	CNOT6L	Q96LI5	555 aa	Known RBP	13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	IPO9	Q96P70	1041 aa	Known RBP	13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	XPO6	Q96QU8	1125 aa	Known RBP	13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	HINFP	Q9BQA5	517 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	INTS2	Q9H0H0	1204 aa	Known RBP	13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	NUP62CL	Q9H1M0	184 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	THAP9	Q9H5L6	903 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	ARHGEF4	Q9NR80	690 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	MMP17	Q9ULZ9	603 aa		13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	KIAA1549L	Q6ZVL6	1849 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	SART1	O43290	800 aa	Known RBP	13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	MED7	O43513	233 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms