RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 DENND2CQ68D51 928 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 SUMO4Q6EEV6 95 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 KRT73Q86Y46 540 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 SAMD3Q8N6K7 520 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 NGDNQ8NEJ9 315 aaKnown RBP5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 REPS1Q96D71 796 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 SLC39A13Q96H72 371 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 WDYHV1Q96HA8 205 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 VPS50Q96JG6 964 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 CRAMP1Q96RY5 1269 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 CIPCQ9C0C6 399 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 TFCP2L1Q9NZI6 479 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 CDC23Q9UJX2 597 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 COX11Q9Y6N1 276 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 A8MVJ9 347 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 PLA2G6O60733 806 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 TMEM225BP0DP42 221 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 PECAM1P16284 738 aaPredicted RBP5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 EGR1P18146 543 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 MST1P26927 711 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 PPM1AP35813 382 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 RHBDL3P58872 404 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 EIF4A1P60842 406 aaKnown RBP5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 FHL3Q13643 280 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 MAPKAPK3Q16644 382 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 SLC5A9Q2M3M2 681 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 ARHGAP15Q53QZ3 475 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 RNASE12Q5GAN4 147 aaKnown RBP5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 FCRLBQ6BAA4 426 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 ABLIM2Q6H8Q1 611 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 TRIM72Q6ZMU5 477 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 PRIMA1Q86XR5 153 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 SFTPA1Q8IWL2 248 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 TERB1Q8NA31 727 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 SUN3Q8TAQ9 357 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 CYP2W1Q8TAV3 490 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 DAZAP1Q96EP5 407 aaKnown RBP5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 SNX15Q9NRS6 342 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 TM7SF3Q9NS93 570 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 SLC39A10Q9ULF5 831 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 DAAM1Q9Y4D1 1078 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 COL15A1P39059 1388 aa5.36□□□□□ -1.55
SMCHD1-204ENST00000581226 SMIM22K7EJ46 135 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 ZSCAN9O15535 394 aaPredicted RBP5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 TMPRSS11DO60235 418 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 SRGAP2BP0DMP2 458 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 SLC5A2P31639 672 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 HTR7P34969 479 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 TECP42680 631 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 DIO1P49895 249 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 COPB1P53618 953 aaKnown RBP5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 LMAN2Q12907 356 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 OS9Q13438 667 aaPredicted RBP5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 KIRREL2Q6UWL6 708 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 MUL1Q969V5 352 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 GRAMD1AQ96CP6 724 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 C18orf8Q96DM3 657 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 MMS19Q96T76 1030 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 STK33Q9BYT3 514 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 NECTIN3Q9NQS3 549 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 SERGEFQ9UGK8 458 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 ASAP1Q9ULH1 1129 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 LRCH1Q9Y2L9 728 aa5.35□□□□□ -1.55
SMCHD1-204ENST00000581226 AOX1Q06278 1338 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 ADAMTS3O15072 1205 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 WDR47O94967 919 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 C1RP00736 705 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 VIPP01282 170 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 ADRA1DP25100 572 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 MCM5P33992 734 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 DEUP1Q05D60 604 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 ATP1A4Q13733 1029 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 STARD3Q14849 445 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 ACOX1Q15067 660 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 RAB30Q15771 203 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 TMEM119Q4V9L6 283 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 TMTC4Q5T4D3 741 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 C1orf228Q6PIY5 440 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 P3H2Q8IVL5 708 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 TMEM41AQ96HV5 264 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 SNX18Q96RF0 628 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 PLCB1Q9NQ66 1216 aa5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 MAGED2Q9UNF1 606 aaPredicted RBP5.34□□□□□ -1.55
SMCHD1-204ENST00000581226 CA12O43570 354 aa5.33□□□□□ -1.56
SMCHD1-204ENST00000581226 PBX1P40424 430 aa5.33□□□□□ -1.56
SMCHD1-204ENST00000581226 RENBPP51606 427 aa5.33□□□□□ -1.56
SMCHD1-204ENST00000581226 NHLH1Q02575 133 aa5.33□□□□□ -1.56
SMCHD1-204ENST00000581226 NSUN2Q08J23 767 aaKnown RBP eCLIP5.33□□□□□ -1.56
SMCHD1-204ENST00000581226 MTAPQ13126 283 aa5.33□□□□□ -1.56
SMCHD1-204ENST00000581226 MORC3Q14149 939 aa5.33□□□□□ -1.56
SMCHD1-204ENST00000581226 ARL6IP4Q66PJ3 421 aaKnown RBP5.33□□□□□ -1.56
SMCHD1-204ENST00000581226 GRHL2Q6ISB3 625 aa5.33□□□□□ -1.56
SMCHD1-204ENST00000581226 GGT6Q6P531 493 aa5.33□□□□□ -1.56
SMCHD1-204ENST00000581226 SERPINA13PQ6UXR4 307 aa5.33□□□□□ -1.56
SMCHD1-204ENST00000581226 ZNF788Q6ZQV5 615 aa5.33□□□□□ -1.56
SMCHD1-204ENST00000581226 BCDIN3DQ7Z5W3 292 aaKnown RBP5.33□□□□□ -1.56
SMCHD1-204ENST00000581226 SPICE1Q8N0Z3 855 aa5.33□□□□□ -1.56
SMCHD1-204ENST00000581226 PNPLA1Q8N8W4 532 aa5.33□□□□□ -1.56
SMCHD1-204ENST00000581226 IPO4Q8TEX9 1081 aaKnown RBP5.33□□□□□ -1.56
SMCHD1-204ENST00000581226 WDR24Q96S15 920 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms