RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 WDR35Q9P2L0 1181 aa10.88□□□□□ -0.67
GGA3-210ENST00000580799 MYOFQ9NZM1 2061 aa10.88□□□□□ -0.67
GGA3-210ENST00000580799 IGF2RP11717 2491 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 ATXN2Q99700 1313 aaKnown RBP10.87□□□□□ -0.67
GGA3-210ENST00000580799 PCDH15Q96QU1 1955 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 A0A1W2PQD8 194 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 A0A1W2PQF6 199 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 OPHN1O60890 802 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 TOP3BO95985 862 aaKnown RBP10.87□□□□□ -0.67
GGA3-210ENST00000580799 IRF1P10914 325 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 ATP5C1P36542 298 aaKnown RBP10.87□□□□□ -0.67
GGA3-210ENST00000580799 CDH8P55286 799 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 ZNF33AQ06730 810 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 SHC4Q6S5L8 630 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 ACOT1Q86TX2 421 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 UNC93AQ86WB7 457 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 CHPFQ8IZ52 775 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 CRYBG2Q8N1P7 616 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 PARD3BQ8TEW8 1205 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 TMEM174Q8WUU8 243 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 ZCCHC14Q8WYQ9 949 aaKnown RBP10.87□□□□□ -0.67
GGA3-210ENST00000580799 TAF4BQ92750 862 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 BBS2Q9BXC9 721 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 CYLDQ9NQC7 956 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.87□□□□□ -0.675e-9■■■■■ 51.3
GGA3-210ENST00000580799 DNAJC17Q9NVM6 304 aaKnown RBP10.87□□□□□ -0.67
GGA3-210ENST00000580799 MARK1Q9P0L2 795 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 LSM7Q9UK45 103 aaKnown RBP10.87□□□□□ -0.67
GGA3-210ENST00000580799 MSRB2Q9Y3D2 182 aa10.87□□□□□ -0.67
GGA3-210ENST00000580799 AKAP13Q12802 2813 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 IGHV1OR15-9A0A0B4J2B8 117 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 LRRIQ3A6PVS8 624 aaPredicted RBP10.86□□□□□ -0.67
GGA3-210ENST00000580799 NEDD8-MDP1E9PL57 170 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 GFRA2O00451 464 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 ARHGAP33O14559 1287 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 POLR2DO15514 142 aaKnown RBP10.86□□□□□ -0.67
GGA3-210ENST00000580799 ZZEF1O43149 2961 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 HYAL3O43820 417 aaPredicted RBP10.86□□□□□ -0.67
GGA3-210ENST00000580799 GREM1O60565 184 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 C4BPAP04003 597 aaKnown RBP10.86□□□□□ -0.67
GGA3-210ENST00000580799 RPN1P04843 607 aaKnown RBP10.86□□□□□ -0.67
GGA3-210ENST00000580799 SYPP08247 313 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 TYRP14679 529 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 CASP4P49662 377 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 SLC14A1Q13336 389 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 SGSM1Q2NKQ1 1148 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 EGFLAMQ63HQ2 1017 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 KLHDC10Q6PID8 442 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 SCARA5Q6ZMJ2 495 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 SLC9A9Q8IVB4 645 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 MINDY1Q8N5J2 469 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 PLEKHO2Q8TD55 490 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 SLC2A14Q8TDB8 520 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 IPO4Q8TEX9 1081 aaKnown RBP10.86□□□□□ -0.67
GGA3-210ENST00000580799 SMOQ99835 787 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 GABRG3Q99928 467 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 GTPBP2Q9BX10 602 aaKnown RBP10.86□□□□□ -0.67
GGA3-210ENST00000580799 KLF16Q9BXK1 252 aaPredicted RBP10.86□□□□□ -0.67
GGA3-210ENST00000580799 FAM124BQ9H5Z6 455 aaPredicted RBP10.86□□□□□ -0.67
GGA3-210ENST00000580799 CD248Q9HCU0 757 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 PNPLA8Q9NP80 782 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 SLC39A2Q9NP94 309 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 DNAAF2Q9NVR5 837 aaKnown RBP10.86□□□□□ -0.67
GGA3-210ENST00000580799 SUSD2Q9UGT4 822 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 RALYQ9UKM9 306 aaKnown RBP10.86□□□□□ -0.67
GGA3-210ENST00000580799 HCN2Q9UL51 889 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 SCML2Q9UQR0 700 aa10.86□□□□□ -0.67
GGA3-210ENST00000580799 ASCC3Q8N3C0 2202 aaKnown RBP10.85□□□□□ -0.67
GGA3-210ENST00000580799 SPAARA0A1B0GVQ0 90 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 FAM221BA6H8Z2 402 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 SRRM3A6NNA2 597 aaPredicted RBP10.85□□□□□ -0.67
GGA3-210ENST00000580799 IKBKBO14920 756 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 NPC1O15118 1278 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 TRIM24O15164 1050 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 VNN1O95497 513 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 FAM200BP0CF97 657 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 PDIA4P13667 645 aaKnown RBP10.85□□□□□ -0.67
GGA3-210ENST00000580799 CCDC130P13994 396 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 NDUFV2P19404 249 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 WASP42768 502 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 DGKGP49619 791 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 PSEN1P49768 467 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 ZNF132P52740 706 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 NDST1P52848 882 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 MAP3K7CLP57077 242 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 ZNF423Q2M1K9 1284 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 ZACNQ401N2 412 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 SYCP2LQ5T4T6 812 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 KIAA1211LQ6NV74 962 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 MIB1Q86YT6 1006 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 SLC41A1Q8IVJ1 513 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 ZNF276Q8N554 614 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 ZMIZ2Q8NF64 920 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 TMC2Q8TDI7 906 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 FOXJ1Q92949 421 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 WBP2Q969T9 261 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 ZNF419Q96HQ0 510 aaPredicted RBP10.85□□□□□ -0.67
GGA3-210ENST00000580799 MRGPRX1Q96LB2 322 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 HSPA12BQ96MM6 686 aa10.85□□□□□ -0.67
GGA3-210ENST00000580799 ACOX2Q99424 681 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms