RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 PANK4Q9NVE7 773 aa20.28■□□□□ 0.84
NDEL1-209ENST00000580738 CACNA2D2Q9NY47 1150 aa20.28■□□□□ 0.84
NDEL1-209ENST00000580738 GMIPQ9P107 970 aa20.28■□□□□ 0.84
NDEL1-209ENST00000580738 HELZ2Q9BYK8 2649 aaKnown RBP20.27■□□□□ 0.84
NDEL1-209ENST00000580738 BPTFQ12830 3046 aa20.27■□□□□ 0.84
NDEL1-209ENST00000580738 A8MXQ7 604 aa20.27■□□□□ 0.84
NDEL1-209ENST00000580738 NEDD8-MDP1E9PL57 170 aa20.27■□□□□ 0.84
NDEL1-209ENST00000580738 GREM1O60565 184 aa20.27■□□□□ 0.84
NDEL1-209ENST00000580738 SURF1Q15526 300 aa20.27■□□□□ 0.84
NDEL1-209ENST00000580738 WDR45BQ5MNZ6 344 aa20.27■□□□□ 0.84
NDEL1-209ENST00000580738 KIAA1324Q6UXG2 1013 aaKnown RBP20.27■□□□□ 0.84
NDEL1-209ENST00000580738 GLRX5Q86SX6 157 aa20.27■□□□□ 0.84
NDEL1-209ENST00000580738 MARCH9Q86YJ5 346 aa20.27■□□□□ 0.84
NDEL1-209ENST00000580738 CLIC6Q96NY7 704 aa20.27■□□□□ 0.84
NDEL1-209ENST00000580738 CLIC4Q9Y696 253 aa20.27■□□□□ 0.84
NDEL1-209ENST00000580738 KIAA0391O15091 583 aaKnown RBP20.26■□□□□ 0.83
NDEL1-209ENST00000580738 CACNG3O60359 315 aa20.26■□□□□ 0.83
NDEL1-209ENST00000580738 FAM163BP0C2L3 166 aa20.26■□□□□ 0.83
NDEL1-209ENST00000580738 ZDHHC11BP0C7U3 371 aa20.26■□□□□ 0.83
NDEL1-209ENST00000580738 DLATP10515 647 aaKnown RBP20.26■□□□□ 0.83
NDEL1-209ENST00000580738 TYRP14679 529 aa20.26■□□□□ 0.83
NDEL1-209ENST00000580738 TUBP50607 506 aa20.26■□□□□ 0.83
NDEL1-209ENST00000580738 SLC5A3P53794 718 aa20.26■□□□□ 0.83
NDEL1-209ENST00000580738 LARP1BQ659C4 914 aaKnown RBP20.26■□□□□ 0.83
NDEL1-209ENST00000580738 TPGS1Q6ZTW0 290 aa20.26■□□□□ 0.83
NDEL1-209ENST00000580738 PAQR9Q6ZVX9 377 aa20.26■□□□□ 0.83
NDEL1-209ENST00000580738 SETD7Q8WTS6 366 aaKnown RBP20.26■□□□□ 0.83
NDEL1-209ENST00000580738 SCFD1Q8WVM8 642 aa20.26■□□□□ 0.83
NDEL1-209ENST00000580738 HPS3Q969F9 1004 aa20.26■□□□□ 0.83
NDEL1-209ENST00000580738 BBS2Q9BXC9 721 aa20.26■□□□□ 0.83
NDEL1-209ENST00000580738 ZDHHC5Q9C0B5 715 aa20.26■□□□□ 0.83
NDEL1-209ENST00000580738 IL37Q9NZH6 218 aa20.26■□□□□ 0.83
NDEL1-209ENST00000580738 HSPBP1Q9NZL4 362 aa20.26■□□□□ 0.83
NDEL1-209ENST00000580738 FBXO2Q9UK22 296 aaPredicted RBP20.26■□□□□ 0.83
NDEL1-209ENST00000580738 CD2BP2O95400 341 aaKnown RBP20.25■□□□□ 0.83
NDEL1-209ENST00000580738 TBX18O95935 607 aa20.25■□□□□ 0.83
NDEL1-209ENST00000580738 CD6P30203 668 aa20.25■□□□□ 0.83
NDEL1-209ENST00000580738 HOXD13P35453 343 aa20.25■□□□□ 0.83
NDEL1-209ENST00000580738 TNNC1P63316 161 aa20.25■□□□□ 0.83
NDEL1-209ENST00000580738 HTR3DQ70Z44 454 aa20.25■□□□□ 0.83
NDEL1-209ENST00000580738 BRAPQ7Z569 592 aa20.25■□□□□ 0.83
NDEL1-209ENST00000580738 ZCCHC9Q8N567 271 aaKnown RBP20.25■□□□□ 0.83
NDEL1-209ENST00000580738 RDH13Q8NBN7 331 aa20.25■□□□□ 0.83
NDEL1-209ENST00000580738 DNASE2BQ8WZ79 361 aa20.25■□□□□ 0.83
NDEL1-209ENST00000580738 TOE1Q96GM8 510 aaKnown RBP20.25■□□□□ 0.83
NDEL1-209ENST00000580738 PANK2Q9BZ23 570 aa20.25■□□□□ 0.83
NDEL1-209ENST00000580738 NACA2Q9H009 215 aa20.25■□□□□ 0.83
NDEL1-209ENST00000580738 KIAA1522Q9P206 1035 aaPredicted RBP20.25■□□□□ 0.83
NDEL1-209ENST00000580738 NXF1Q9UBU9 619 aaKnown RBP20.25■□□□□ 0.83
NDEL1-209ENST00000580738 A0A1B0GTW7 788 aa20.24■□□□□ 0.83
NDEL1-209ENST00000580738 MEI4A8MW99 385 aa20.24■□□□□ 0.83
NDEL1-209ENST00000580738 TNNI1P19237 187 aa20.24■□□□□ 0.83
NDEL1-209ENST00000580738 BNC1Q01954 994 aa20.24■□□□□ 0.83
NDEL1-209ENST00000580738 TMPRSS7Q7RTY8 843 aa20.24■□□□□ 0.83
NDEL1-209ENST00000580738 FAM35AQ86V20 835 aa20.24■□□□□ 0.83
NDEL1-209ENST00000580738 CCDC127Q96BQ5 260 aa20.24■□□□□ 0.83
NDEL1-209ENST00000580738 XPO6Q96QU8 1125 aaKnown RBP20.24■□□□□ 0.83
NDEL1-209ENST00000580738 MED10Q9BTT4 135 aa20.24■□□□□ 0.83
NDEL1-209ENST00000580738 GPR174Q9BXC1 333 aa20.24■□□□□ 0.83
NDEL1-209ENST00000580738 MIR1-1HGQ9H1L0 117 aa20.24■□□□□ 0.83
NDEL1-209ENST00000580738 GAREM1Q9H706 876 aa20.24■□□□□ 0.83
NDEL1-209ENST00000580738 SCUBE2Q9NQ36 999 aa20.24■□□□□ 0.83
NDEL1-209ENST00000580738 TOR4AQ9NXH8 423 aa20.24■□□□□ 0.83
NDEL1-209ENST00000580738 WSB2Q9NYS7 404 aaPredicted RBP20.24■□□□□ 0.83
NDEL1-209ENST00000580738 A0A087X0B3 334 aa20.23■□□□□ 0.83
NDEL1-209ENST00000580738 FAM92AA1XBS5 289 aa20.23■□□□□ 0.83
NDEL1-209ENST00000580738 TLR5O60602 858 aa20.23■□□□□ 0.83
NDEL1-209ENST00000580738 CISD3P0C7P0 127 aa20.23■□□□□ 0.83
NDEL1-209ENST00000580738 ATXN1LP0C7T5 689 aaKnown RBP20.23■□□□□ 0.83
NDEL1-209ENST00000580738 NCAM1P13591 858 aa20.23■□□□□ 0.83
NDEL1-209ENST00000580738 CDH8P55286 799 aa20.23■□□□□ 0.83
NDEL1-209ENST00000580738 MYL6P60660 151 aa20.23■□□□□ 0.83
NDEL1-209ENST00000580738 SNRNP35Q16560 246 aaKnown RBP20.23■□□□□ 0.83
NDEL1-209ENST00000580738 FUT11Q495W5 492 aa20.23■□□□□ 0.83
NDEL1-209ENST00000580738 ZNF516Q92618 1163 aa20.23■□□□□ 0.83
NDEL1-209ENST00000580738 BHMTQ93088 406 aa20.23■□□□□ 0.83
NDEL1-209ENST00000580738 P2RY11Q96G91 374 aa20.23■□□□□ 0.83
NDEL1-209ENST00000580738 CRELD1Q96HD1 420 aa20.23■□□□□ 0.83
NDEL1-209ENST00000580738 KLF16Q9BXK1 252 aaPredicted RBP20.23■□□□□ 0.83
NDEL1-209ENST00000580738 XYLT2Q9H1B5 865 aa20.23■□□□□ 0.83
NDEL1-209ENST00000580738 DMAP1Q9NPF5 467 aaPredicted RBP20.23■□□□□ 0.83
NDEL1-209ENST00000580738 TM7SF3Q9NS93 570 aa20.23■□□□□ 0.83
NDEL1-209ENST00000580738 MARK1Q9P0L2 795 aa20.23■□□□□ 0.83
NDEL1-209ENST00000580738 WDR35Q9P2L0 1181 aa20.23■□□□□ 0.83
NDEL1-209ENST00000580738 SMC3Q9UQE7 1217 aa20.23■□□□□ 0.83
NDEL1-209ENST00000580738 FNDC3AQ9Y2H6 1198 aaKnown RBP20.23■□□□□ 0.83
NDEL1-209ENST00000580738 SRPRBQ9Y5M8 271 aaKnown RBP20.23■□□□□ 0.83
NDEL1-209ENST00000580738 ASXL3Q9C0F0 2248 aa20.22■□□□□ 0.83
NDEL1-209ENST00000580738 URB1O60287 2271 aaKnown RBP20.22■□□□□ 0.83
NDEL1-209ENST00000580738 KCNJ18B7U540 433 aa20.22■□□□□ 0.83
NDEL1-209ENST00000580738 GFRA2O00451 464 aa20.22■□□□□ 0.83
NDEL1-209ENST00000580738 CILPO75339 1184 aa20.22■□□□□ 0.83
NDEL1-209ENST00000580738 DGKGP49619 791 aa20.22■□□□□ 0.83
NDEL1-209ENST00000580738 BAHD1Q8TBE0 780 aaPredicted RBP20.22■□□□□ 0.83
NDEL1-209ENST00000580738 COL26A1Q96A83 441 aa20.22■□□□□ 0.83
NDEL1-209ENST00000580738 CGRRF1Q99675 332 aa20.22■□□□□ 0.83
NDEL1-209ENST00000580738 MKRN2Q9H000 416 aaKnown RBP20.22■□□□□ 0.83
NDEL1-209ENST00000580738 GZF1Q9H116 711 aaPredicted RBP20.22■□□□□ 0.83
NDEL1-209ENST00000580738 SMYD3Q9H7B4 428 aa20.22■□□□□ 0.83
NDEL1-209ENST00000580738 PRDM16Q9HAZ2 1276 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms