RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 LRRC3Q9BY71 257 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 THAP2Q9H0W7 228 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.96□□□□□ -0.01
SKA2-205ENST00000580541 MYO1AQ9UBC5 1043 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 ZFP37Q9Y6Q3 630 aaPredicted RBP14.96□□□□□ -0.01
SKA2-205ENST00000580541 PATJQ8NI35 1801 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 A0A1W2PQH9 124 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 KRT86O43790 486 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 GABBR2O75899 941 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 F9P00740 461 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 NCAM1P13591 858 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 RARGP13631 454 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 KCNA5P22460 613 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 NOS2P35228 1153 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 MATKP42679 507 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 VAV2P52735 878 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 MAMLD1Q13495 774 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 MTF1Q14872 753 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 AAK1Q2M2I8 961 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 SMRP1Q8NCR6 262 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 MAFAQ8NHW3 353 aaPredicted RBP14.95□□□□□ -0.02
SKA2-205ENST00000580541 FEZF2Q8TBJ5 459 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 APOL5Q9BWW9 433 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 TASP1Q9H6P5 420 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 IL21Q9HBE4 155 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 ZNF334Q9HCZ1 680 aaPredicted RBP14.95□□□□□ -0.02
SKA2-205ENST00000580541 HCFC1R1Q9NWW0 138 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 GDE1Q9NZC3 331 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 CTTNBP2NLQ9P2B4 639 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 DNMT3LQ9UJW3 386 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 PAXBP1Q9Y5B6 917 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 ADGRG1Q9Y653 693 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 CDH23Q9H251 3354 aa14.95□□□□□ -0.02
SKA2-205ENST00000580541 A0A0A6YYK5 440 aaPredicted RBP14.94□□□□□ -0.02
SKA2-205ENST00000580541 TRAV19A0A0A6YYK7 116 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 A0A1W2PRU2 124 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 MYO1FO00160 1098 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 ZNF263O14978 683 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 TLR5O60602 858 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 PDGFRAP16234 1089 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 HDCP19113 662 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 SDC4P31431 198 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 NOP2P46087 812 aaKnown RBP14.94□□□□□ -0.02
SKA2-205ENST00000580541 DLX2Q07687 328 aaPredicted RBP14.94□□□□□ -0.02
SKA2-205ENST00000580541 MTA1Q13330 715 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 SMAD4Q13485 552 aaKnown RBP14.94□□□□□ -0.02
SKA2-205ENST00000580541 ACAP1Q15027 740 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 C2CD6Q53TS8 623 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 DCAF6Q58WW2 860 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 C10orf120Q5SQS8 335 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 GAREM2Q75VX8 874 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 SND1Q7KZF4 910 aaKnown RBP eCLIP14.94□□□□□ -0.02
SKA2-205ENST00000580541 SCD5Q86SK9 330 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 CLEC4CQ8WTT0 213 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 RFFLQ8WZ73 363 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 SLC2A13Q96QE2 648 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 NUP85Q9BW27 656 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 SLITRK6Q9H5Y7 841 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 METTL5Q9NRN9 209 aaKnown RBP14.94□□□□□ -0.02
SKA2-205ENST00000580541 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.94□□□□□ -0.02
SKA2-205ENST00000580541 TJP2Q9UDY2 1190 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 IP6K2Q9UHH9 426 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 TMEM59LQ9UK28 342 aa14.94□□□□□ -0.02
SKA2-205ENST00000580541 BTNL10A8MVZ5 291 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 PJA2O43164 708 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 DAB1O75553 588 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 AVPR1AP37288 418 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 ARHGAP25P42331 645 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 NAP1L1P55209 391 aaKnown RBP14.93□□□□□ -0.02
SKA2-205ENST00000580541 COG7P83436 770 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 PIGHQ14442 188 aaPredicted RBP14.93□□□□□ -0.02
SKA2-205ENST00000580541 CBX2Q14781 532 aaPredicted RBP14.93□□□□□ -0.02
SKA2-205ENST00000580541 TCEAL1Q15170 157 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 SLC25A52Q3SY17 297 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 LEXMQ3ZCV2 418 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 PRSS36Q5K4E3 855 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 GPR158Q5T848 1215 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 ZNF662Q6ZS27 426 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 OTOP3Q7RTS5 596 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 PHLDB2Q86SQ0 1253 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 DEFB106AQ8N104 65 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 SLC35G2Q8TBE7 412 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 FNIP1Q8TF40 1166 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 UBE2Q2Q8WVN8 375 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 NDRG1Q92597 394 aaKnown RBP14.93□□□□□ -0.02
SKA2-205ENST00000580541 ACSF2Q96CM8 615 aaPredicted RBP14.93□□□□□ -0.02
SKA2-205ENST00000580541 ZNF830Q96NB3 372 aaPredicted RBP14.93□□□□□ -0.02
SKA2-205ENST00000580541 DDX23Q9BUQ8 820 aaKnown RBP14.93□□□□□ -0.02
SKA2-205ENST00000580541 TRPC7Q9HCX4 862 aa14.93□□□□□ -0.02
SKA2-205ENST00000580541 TCRBV5S1A1TA0A578 114 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 GOLGA6L9A6NEM1 432 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 TMEM191CA6NGB0 347 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 H3BQ06 376 aaPredicted RBP14.92□□□□□ -0.02
SKA2-205ENST00000580541 GRAP2O75791 330 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 RNF8O76064 485 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 SLC2A3P11169 496 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 GPD1P21695 349 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 WEE1P30291 646 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 RFC1P35251 1148 aaPredicted RBP14.92□□□□□ -0.02
SKA2-205ENST00000580541 ZNF143P52747 638 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms