RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.45□□□□□ -0.58
NDEL1-208ENST00000580237 R4GN57 208 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 SPAG17Q6Q759 2223 aa11.45□□□□□ -0.58
NDEL1-208ENST00000580237 MYO18AQ92614 2054 aaKnown RBP11.45□□□□□ -0.58
NDEL1-208ENST00000580237 WDFY4Q6ZS81 3184 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 TULP2O00295 520 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 TRDMT1O14717 391 aaKnown RBP11.44□□□□□ -0.58
NDEL1-208ENST00000580237 GFRA3O60609 400 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 LETM1O95202 739 aaPredicted RBP11.44□□□□□ -0.58
NDEL1-208ENST00000580237 TBX18O95935 607 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 EGFP01133 1207 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 CALCAP01258 141 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 SLC9A1P19634 815 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 DRD1P21728 446 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 GNA15P30679 374 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 NBL1P41271 181 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 CXCL12P48061 93 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 PGFP49763 221 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 ZNF132P52740 706 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 FZD5Q13467 585 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 CCINQ13939 588 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 DHCR24Q15392 516 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 ANO4Q32M45 955 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 VWA3BQ502W6 1294 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 RAB41Q5JT25 222 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 FSTL4Q6MZW2 842 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 GJB7Q6PEY0 223 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 KLHDC10Q6PID8 442 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 TSSK4Q6SA08 328 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 RBM43Q6ZSC3 357 aaKnown RBP11.44□□□□□ -0.58
NDEL1-208ENST00000580237 IRF2BP1Q8IU81 584 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 BBS7Q8IWZ6 715 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 ZNF687Q8N1G0 1237 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 SYNPOQ8N3V7 929 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 SPEM1Q8N4L4 309 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 ATRIPQ8WXE1 791 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 NDST4Q9H3R1 872 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 ST7Q9NRC1 585 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 SAMSN1Q9NSI8 373 aaKnown RBP11.44□□□□□ -0.58
NDEL1-208ENST00000580237 OLA1Q9NTK5 396 aaKnown RBP11.44□□□□□ -0.58
NDEL1-208ENST00000580237 OSER1Q9NX31 292 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 TAB2Q9NYJ8 693 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 CLIC5Q9NZA1 410 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 USP3Q9Y6I4 520 aa11.44□□□□□ -0.58
NDEL1-208ENST00000580237 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.43□□□□□ -0.58
NDEL1-208ENST00000580237 RNF225M0QZC1 329 aaPredicted RBP11.43□□□□□ -0.58
NDEL1-208ENST00000580237 PIK3R2O00459 728 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 ATG13O75143 517 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 RNF40O75150 1001 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 HMBSP08397 361 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 PON1P27169 355 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 GALK1P51570 392 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 SATB1Q01826 763 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 GAD2Q05329 585 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 KDSRQ06136 332 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 RAPGEF1Q13905 1077 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 CNGA2Q16280 664 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 ZNF528Q3MIS6 628 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 FBXO43Q4G163 708 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 TCP11X2Q5H9J9 407 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 LY6G5CQ5SRR4 150 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 NAIF1Q69YI7 327 aaPredicted RBP11.43□□□□□ -0.58
NDEL1-208ENST00000580237 C11orf57Q6ZUT1 292 aaPredicted RBP11.43□□□□□ -0.58
NDEL1-208ENST00000580237 SCD5Q86SK9 330 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 CCDC26Q8TAB7 109 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 ENOX1Q8TC92 643 aaKnown RBP11.43□□□□□ -0.58
NDEL1-208ENST00000580237 ACDQ96AP0 544 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 HINFPQ9BQA5 517 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 KLF16Q9BXK1 252 aaPredicted RBP11.43□□□□□ -0.58
NDEL1-208ENST00000580237 CNGB3Q9NQW8 809 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 MARCH2Q9P0N8 246 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 FAM186AA6NE01 2351 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 RALGAPA1Q6GYQ0 2036 aa11.43□□□□□ -0.58
NDEL1-208ENST00000580237 SLC12A8A0AV02 714 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 NEDD8-MDP1E9PL57 170 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 SART1O43290 800 aaKnown RBP11.42□□□□□ -0.58
NDEL1-208ENST00000580237 APODP05090 189 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 HOXD11P31277 338 aaPredicted RBP11.42□□□□□ -0.58
NDEL1-208ENST00000580237 NRLP54845 237 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 SEC13P55735 322 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 COG7P83436 770 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 MYL5Q02045 173 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 APBA1Q02410 837 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 MIIPQ5JXC2 388 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 FKBP15Q5T1M5 1219 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 HEATR6Q6AI08 1181 aaKnown RBP11.42□□□□□ -0.58
NDEL1-208ENST00000580237 CAVIN1Q6NZI2 390 aaKnown RBP11.42□□□□□ -0.58
NDEL1-208ENST00000580237 MAML2Q8IZL2 1156 aaPredicted RBP11.42□□□□□ -0.58
NDEL1-208ENST00000580237 KCTD13Q8WZ19 329 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 NDRG1Q92597 394 aaKnown RBP11.42□□□□□ -0.58
NDEL1-208ENST00000580237 EDEM1Q92611 657 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 FAM149B1Q96BN6 582 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 LSM14BQ9BX40 385 aaKnown RBP11.42□□□□□ -0.58
NDEL1-208ENST00000580237 BBS2Q9BXC9 721 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 FAM126AQ9BYI3 521 aaPredicted RBP11.42□□□□□ -0.58
NDEL1-208ENST00000580237 MIS12Q9H081 205 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 NAT10Q9H0A0 1025 aaKnown RBP11.42□□□□□ -0.58
NDEL1-208ENST00000580237 ARHGEF4Q9NR80 690 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 SPHK2Q9NRA0 654 aa11.42□□□□□ -0.58
NDEL1-208ENST00000580237 ZSCAN32Q9NX65 697 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms