RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 E2F5Q15329 346 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 STXBP4Q6ZWJ1 553 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TMEM25Q86YD3 366 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 WDR49Q8IV35 697 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 BBS7Q8IWZ6 715 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 SCUBE3Q8IX30 993 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CADM4Q8NFZ8 388 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 OR6B3Q8NGW1 331 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 SETD7Q8WTS6 366 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 DNASE2BQ8WZ79 361 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 LRIG1Q96JA1 1093 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 MRGPRX1Q96LB2 322 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CBWD1Q9BRT8 395 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 NACA2Q9H009 215 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 PCIF1Q9H4Z3 704 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 KIAA1586Q9HCI6 787 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.95□□□□□ -0.342e-7■■■□□ 19.2
CDK5RAP3-216ENST00000579853 DNAJC17Q9NVM6 304 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 COMMD8Q9NX08 183 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 PCDHGB2Q9Y5G2 931 aa12.95□□□□□ -0.34
CDK5RAP3-216ENST00000579853 MEI4A8MW99 385 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 NPC1O15118 1278 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 FLRT2O43155 660 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CACNG3O60359 315 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TXLNAP40222 546 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TNNC1P63316 161 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 GOLGA8FQ08AF8 430 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 GOLGA8DPQ0D2H9 430 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 SUZ12Q15022 739 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 EGFLAMQ63HQ2 1017 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 SCARA3Q6AZY7 606 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 HTR3DQ70Z44 454 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 SLCO6A1Q86UG4 719 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 MIB1Q86YT6 1006 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 OR5B17Q8NGF7 314 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 DNAJC19Q96DA6 116 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 MARK1Q9P0L2 795 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TBC1D7Q9P0N9 293 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 HCN2Q9UL51 889 aa12.94□□□□□ -0.34
CDK5RAP3-216ENST00000579853 A8MXQ7 604 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 E9PAM4 449 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 NEDD8-MDP1E9PL57 170 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TYRP14679 529 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 IDEP14735 1019 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 OXTRP30559 389 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 MATKP42679 507 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 WDR72Q3MJ13 1102 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 KIAA1324Q6UXG2 1013 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TRAPPC11Q7Z392 1133 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 BRAPQ7Z569 592 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 B3GALNT2Q8NCR0 500 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 ENGASEQ8NFI3 743 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 MRPL45Q9BRJ2 306 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 BBS2Q9BXC9 721 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 ZNF518BQ9C0D4 1074 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 GAREM1Q9H706 876 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 DMAP1Q9NPF5 467 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TM7SF3Q9NS93 570 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 WSB2Q9NYS7 404 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 IL37Q9NZH6 218 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CHORDC1Q9UHD1 332 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 LSM7Q9UK45 103 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 HECTD1Q9ULT8 2610 aa12.93□□□□□ -0.34
CDK5RAP3-216ENST00000579853 A0A087WV48 116 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 FAM92AA1XBS5 289 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TK2O00142 265 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 BCAT2O15382 392 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 DKK1O94907 266 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 STAU1O95793 577 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 ZDHHC11BP0C7U3 371 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 NCAM1P13591 858 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 MAOBP27338 520 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 GJB2P29033 226 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 DGKGP49619 791 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 SLC5A3P53794 718 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CACNA2D1P54289 1103 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 GRIN1Q05586 938 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 C19orf57Q0VDD7 668 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 SF3A1Q15459 793 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 RRAGBQ5VZM2 374 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 DBX2Q6ZNG2 339 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 PDCD7Q8N8D1 485 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 BAHD1Q8TBE0 780 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 RHBDD1Q8TEB9 315 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TOE1Q96GM8 510 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 EPSTI1Q96J88 318 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 FAM84AQ96KN4 292 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TNIP3Q96KP6 325 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 BBC3Q96PG8 261 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 UBL7Q96S82 380 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 ACOX2Q99424 681 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 B3GNT5Q9BYG0 378 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 PCED1AQ9H1Q7 454 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 FBXO44Q9H4M3 255 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CCSER2Q9H7U1 834 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 PRDM16Q9HAZ2 1276 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 ITM2CQ9NQX7 267 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TMEM30AQ9NV96 361 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CACNA2D2Q9NY47 1150 aa12.92□□□□□ -0.34
CDK5RAP3-216ENST00000579853 USP36Q9P275 1121 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms