RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 DOCK6Q96HP0 2047 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 A0A1W2PPC1 479 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 CAPN9O14815 690 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 LRG1P02750 347 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 NCAM1P13591 858 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 EPCAMP16422 314 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 TFE3P19532 575 aaPredicted RBP14.5□□□□□ -0.09
TSEN54-206ENST00000579449 PTPN9P43378 593 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 ATP11AP98196 1134 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 ACAP1Q15027 740 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 TAF12Q16514 161 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 CDO1Q16878 200 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 RAB6CQ53S08 254 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 SH3PXD2AQ5TCZ1 1133 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 SYPL2Q5VXT5 272 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 BTBD8Q5XKL5 378 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 ARHGAP18Q8N392 663 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 ARFGAP1Q8N6T3 406 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 EDEM1Q92611 657 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 CD101Q93033 1021 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 PSMG2Q969U7 264 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 MRPL38Q96DV4 380 aaKnown RBP14.5□□□□□ -0.09
TSEN54-206ENST00000579449 SLITRK1Q96PX8 696 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 TBCBQ99426 244 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 TRIM62Q9BVG3 475 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 RAB6CQ9H0N0 254 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 PLEKHA4Q9H4M7 779 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 ZNF576Q9H609 170 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 TLE6Q9H808 572 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 MAN1C1Q9NR34 630 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 ABCC13Q9NSE7 274 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 OSER1Q9NX31 292 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 EHD2Q9NZN4 543 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 COLQQ9Y215 455 aaPredicted RBP14.5□□□□□ -0.09
TSEN54-206ENST00000579449 ASB3Q9Y575 518 aa14.5□□□□□ -0.09
TSEN54-206ENST00000579449 DENND4CQ5VZ89 1909 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 OBSL1O75147 1896 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 DDX3YO15523 660 aaKnown RBP14.49□□□□□ -0.09
TSEN54-206ENST00000579449 RNF8O76064 485 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 DESP17661 470 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 CTNNA2P26232 953 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 SSR1P43307 286 aaKnown RBP14.49□□□□□ -0.09
TSEN54-206ENST00000579449 NRIP1P48552 1158 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 SULT1E1P49888 294 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 DNA2P51530 1060 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 TAS2R40P59535 323 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 PITX1P78337 314 aaPredicted RBP14.49□□□□□ -0.09
TSEN54-206ENST00000579449 RPS6KA1Q15418 735 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 DUSP6Q16828 381 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 SLC25A52Q3SY17 297 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 PPM1LQ5SGD2 360 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 RTL10Q7L3V2 364 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 BEND5Q7L4P6 421 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 DNAJB7Q7Z6W7 309 aaPredicted RBP14.49□□□□□ -0.09
TSEN54-206ENST00000579449 ITIH5Q86UX2 942 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 FAM172AQ8WUF8 416 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 OVCA2Q8WZ82 227 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 CENPIQ92674 756 aaPredicted RBP14.49□□□□□ -0.09
TSEN54-206ENST00000579449 NT5C3BQ969T7 300 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 TRMT2BQ96GJ1 504 aaKnown RBP14.49□□□□□ -0.09
TSEN54-206ENST00000579449 HES6Q96HZ4 224 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 MYRFLQ96LU7 910 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 NPY6RQ99463 290 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 ADAM33Q9BZ11 813 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 TLR8Q9NR97 1041 aaKnown RBP14.49□□□□□ -0.09
TSEN54-206ENST00000579449 RRN3Q9NYV6 651 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 STAP1Q9ULZ2 295 aa14.49□□□□□ -0.09
TSEN54-206ENST00000579449 MIF4GDA9UHW6 222 aaKnown RBP14.48□□□□□ -0.09
TSEN54-206ENST00000579449 CCL16O15467 120 aa14.48□□□□□ -0.09
TSEN54-206ENST00000579449 LRCH4O75427 683 aa14.48□□□□□ -0.09
TSEN54-206ENST00000579449 ZMYND10O75800 440 aa14.48□□□□□ -0.09
TSEN54-206ENST00000579449 ZDHHC11BP0C7U3 371 aa14.48□□□□□ -0.09
TSEN54-206ENST00000579449 TCF4P15884 667 aa14.48□□□□□ -0.09
TSEN54-206ENST00000579449 MIPP30301 263 aa14.48□□□□□ -0.09
TSEN54-206ENST00000579449 PSEN1P49768 467 aa14.48□□□□□ -0.09
TSEN54-206ENST00000579449 OTUD1Q5VV17 481 aaPredicted RBP14.48□□□□□ -0.09
TSEN54-206ENST00000579449 PAPD7Q5XG87 772 aaKnown RBP14.48□□□□□ -0.09
TSEN54-206ENST00000579449 STRADAQ7RTN6 431 aa14.48□□□□□ -0.09
TSEN54-206ENST00000579449 ELMOD1Q8N336 334 aa14.48□□□□□ -0.09
TSEN54-206ENST00000579449 PDZD8Q8NEN9 1154 aa14.48□□□□□ -0.09
TSEN54-206ENST00000579449 HDAC7Q8WUI4 952 aa14.48□□□□□ -0.09
TSEN54-206ENST00000579449 UBE2Q2Q8WVN8 375 aa14.48□□□□□ -0.09
TSEN54-206ENST00000579449 KRT35Q92764 455 aa14.48□□□□□ -0.09
TSEN54-206ENST00000579449 ZNF512Q96ME7 567 aaPredicted RBP14.48□□□□□ -0.09
TSEN54-206ENST00000579449 ZNF334Q9HCZ1 680 aaPredicted RBP14.48□□□□□ -0.09
TSEN54-206ENST00000579449 UXTQ9UBK9 157 aaPredicted RBP14.48□□□□□ -0.09
TSEN54-206ENST00000579449 SNX12Q9UMY4 172 aa14.48□□□□□ -0.09
TSEN54-206ENST00000579449 HCFC2Q9Y5Z7 792 aa14.48□□□□□ -0.09
TSEN54-206ENST00000579449 TRANK1O15050 2925 aa14.48□□□□□ -0.09
TSEN54-206ENST00000579449 CCDC66A2RUB6 948 aa14.47□□□□□ -0.09
TSEN54-206ENST00000579449 M0QYT0 321 aa14.47□□□□□ -0.09
TSEN54-206ENST00000579449 RFPL2O75678 378 aa14.47□□□□□ -0.09
TSEN54-206ENST00000579449 URI1O94763 535 aaPredicted RBP14.47□□□□□ -0.09
TSEN54-206ENST00000579449 ENDOD1O94919 500 aa14.47□□□□□ -0.09
TSEN54-206ENST00000579449 RALAP11233 206 aa14.47□□□□□ -0.09
TSEN54-206ENST00000579449 RARGP13631 454 aa14.47□□□□□ -0.09
TSEN54-206ENST00000579449 CTNNA1P35221 906 aaKnown RBP14.47□□□□□ -0.09
TSEN54-206ENST00000579449 PCK1P35558 622 aa14.47□□□□□ -0.09
TSEN54-206ENST00000579449 GJC1P36383 396 aa14.47□□□□□ -0.09
TSEN54-206ENST00000579449 MARCKSL1P49006 195 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms