RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 FAM170BA6NMN3 283 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 LEFTY2O00292 366 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 ARNTLO00327 626 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 PES1O00541 588 aaKnown RBP9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 NPC1O15118 1278 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 TLR5O60602 858 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 LSM8O95777 96 aaKnown RBP9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 ADH1CP00326 375 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 ABL1P00519 1130 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 MBL2P11226 248 aaPredicted RBP9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 KRT5P13647 590 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 CCDC130P13994 396 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 GNA15P30679 374 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 HOXA6P31267 233 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 SCNN1AP37088 669 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 VIPR2P41587 438 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 GPR15P49685 360 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 TKTL1P51854 596 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 CYP4F8P98187 520 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 LRMPQ12912 555 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 USP4Q13107 963 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 ZNF77Q15935 545 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 PKDCCQ504Y2 493 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 EFHC1Q5JVL4 640 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 MIIPQ5JXC2 388 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 BTBD8Q5XKL5 378 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 CAVIN1Q6NZI2 390 aaKnown RBP9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 ZC3H14Q6PJT7 736 aaKnown RBP9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 RRAGAQ7L523 313 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 TMEM110Q86TL2 294 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 PIGZQ86VD9 579 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 SCUBE3Q8IX30 993 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 ARL14EPQ8N8R7 260 aaPredicted RBP9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 TMEM35BQ8NCS4 154 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 C1orf131Q8NDD1 294 aaKnown RBP9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 ZMIZ2Q8NF64 920 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 FLCNQ8NFG4 579 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 PJA1Q8NG27 643 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 SH3RF2Q8TEC5 729 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 FAM84AQ96KN4 292 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 ERGIC2Q96RQ1 377 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 TWNKQ96RR1 684 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 DDX50Q9BQ39 737 aaKnown RBP9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 RPP25Q9BUL9 199 aaKnown RBP9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 NUP58Q9BVL2 599 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 TBC1D17Q9HA65 648 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 LTB4R2Q9NPC1 389 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 SAMSN1Q9NSI8 373 aaKnown RBP9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 FANCLQ9NW38 375 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 SLC12A6Q9UHW9 1150 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 DNAJC12Q9UKB3 198 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 HBS1LQ9Y450 684 aaKnown RBP9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 PAXBP1Q9Y5B6 917 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 NME7Q9Y5B8 376 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 PIAS3Q9Y6X2 628 aa9.01□□□□□ -0.97
PPP4R1-210ENST00000578557 TTC28Q96AY4 2481 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 CCDC163A0A0D9SF12 145 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 A0A1W2PQC6 194 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 KRBA1A5PL33 1030 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 GOLGA6L19H0YKK7 550 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 IRAK2O43187 625 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 HCRTO43612 131 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 TIMM44O43615 452 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 NARSO43776 548 aaKnown RBP9□□□□□ -0.97
PPP4R1-210ENST00000578557 PAPSS2O95340 614 aaPredicted RBP9□□□□□ -0.97
PPP4R1-210ENST00000578557 SLC2A3P11169 496 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 RARGP13631 454 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 UCHL3P15374 230 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 ZNF18P17022 549 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 GJA1P17302 382 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 SLC9A1P19634 815 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 CNR2P34972 360 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 STAT1P42224 750 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 GPD2P43304 727 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 HARS2P49590 506 aaKnown RBP9□□□□□ -0.97
PPP4R1-210ENST00000578557 CCR3P51677 355 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 YWHAGP61981 247 aaKnown RBP eCLIP9□□□□□ -0.97
PPP4R1-210ENST00000578557 GAD2Q05329 585 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 PDE4CQ08493 712 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 SDHAF4Q5VUM1 108 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 TRIM72Q6ZMU5 477 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 TPRG1Q6ZUI0 275 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 RSRC2Q7L4I2 434 aaKnown RBP9□□□□□ -0.97
PPP4R1-210ENST00000578557 ARCQ7LC44 396 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 TRMT11Q7Z4G4 463 aaKnown RBP9□□□□□ -0.97
PPP4R1-210ENST00000578557 CCDC105Q8IYK2 499 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 FAM71AQ8IYT1 594 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 SCAMP5Q8TAC9 235 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 PLD4Q96BZ4 506 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 XPO6Q96QU8 1125 aaKnown RBP9□□□□□ -0.97
PPP4R1-210ENST00000578557 SPAG5Q96R06 1193 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 PPP1R9BQ96SB3 815 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 PLA2G2FQ9BZM2 168 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 RNF38Q9H0F5 515 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 PDCL3Q9H2J4 239 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 RETREG1Q9H6L5 497 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 ECT2Q9H8V3 914 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 TMEM63CQ9P1W3 806 aa9□□□□□ -0.97
PPP4R1-210ENST00000578557 NAGPAQ9UK23 515 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms