RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 RARAP10276 462 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 ARSEP51690 589 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 SEL1L2Q5TEA6 688 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 MFSD7Q6UXD7 560 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 ADAT2Q7Z6V5 191 aaKnown RBP13.71□□□□□ -0.21
CTC1-203ENST00000578240 SCD5Q86SK9 330 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 SLC13A5Q86YT5 568 aaPredicted RBP13.71□□□□□ -0.21
CTC1-203ENST00000578240 KLHL23Q8NBE8 558 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 EXD1Q8NHP7 514 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 PHOSPHO2Q8TCD6 241 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 IRGQQ8WZA9 623 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 RPGRIP1Q96KN7 1286 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 RAD9AQ99638 391 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 OXCT2Q9BYC2 517 aaPredicted RBP13.71□□□□□ -0.21
CTC1-203ENST00000578240 ANKZF1Q9H8Y5 726 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 ZWILCHQ9H900 591 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 POPDC2Q9HBU9 364 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.71□□□□□ -0.21
CTC1-203ENST00000578240 PCSK1NQ9UHG2 260 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 USP18Q9UMW8 372 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 LINC01553A4QN01 128 aa13.7□□□□□ -0.22
CTC1-203ENST00000578240 I6L893 689 aaPredicted RBP13.7□□□□□ -0.22
CTC1-203ENST00000578240 ENDOD1O94919 500 aa13.7□□□□□ -0.22
CTC1-203ENST00000578240 ABLIM3O94929 683 aa13.7□□□□□ -0.22
CTC1-203ENST00000578240 SEC24AO95486 1093 aa13.7□□□□□ -0.22
CTC1-203ENST00000578240 MYOGP15173 224 aa13.7□□□□□ -0.22
CTC1-203ENST00000578240 DNAJB2P25686 324 aa13.7□□□□□ -0.22
CTC1-203ENST00000578240 PAFAH1B1P43034 410 aa13.7□□□□□ -0.22
CTC1-203ENST00000578240 SSR1P43307 286 aaKnown RBP13.7□□□□□ -0.22
CTC1-203ENST00000578240 DUSP4Q13115 394 aa13.7□□□□□ -0.22
CTC1-203ENST00000578240 TAZQ16635 292 aa13.7□□□□□ -0.22
CTC1-203ENST00000578240 KCTD19Q17RG1 926 aaPredicted RBP13.7□□□□□ -0.22
CTC1-203ENST00000578240 SLC25A52Q3SY17 297 aa13.7□□□□□ -0.22
CTC1-203ENST00000578240 DCAF6Q58WW2 860 aa13.7□□□□□ -0.22
CTC1-203ENST00000578240 MMGT1Q8N4V1 131 aa13.7□□□□□ -0.22
CTC1-203ENST00000578240 C2orf15Q8WU43 125 aaKnown RBP13.7□□□□□ -0.22
CTC1-203ENST00000578240 SNRNP25Q9BV90 132 aaKnown RBP13.7□□□□□ -0.22
CTC1-203ENST00000578240 NMUR1Q9HB89 426 aa13.7□□□□□ -0.22
CTC1-203ENST00000578240 ANLNQ9NQW6 1124 aa13.7□□□□□ -0.22
CTC1-203ENST00000578240 OSER1Q9NX31 292 aa13.7□□□□□ -0.22
CTC1-203ENST00000578240 MYO18AQ92614 2054 aaKnown RBP13.69□□□□□ -0.22
CTC1-203ENST00000578240 hCG_1818297A0A087WSY0 165 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 GRXCR1A8MXD5 290 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 FSCN2O14926 492 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 SART1O43290 800 aaKnown RBP13.69□□□□□ -0.22
CTC1-203ENST00000578240 TLL1O43897 1013 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 RNF8O76064 485 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 IGLV3-25P01717 112 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 URODP06132 367 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 RALAP11233 206 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 NOS2P35228 1153 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 PTPN7P35236 360 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 CDKN2BP42772 138 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 SULT1E1P49888 294 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 MRPS25P82663 173 aaKnown RBP13.69□□□□□ -0.22
CTC1-203ENST00000578240 SMARCB1Q12824 385 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 IFRD2Q12894 506 aaPredicted RBP13.69□□□□□ -0.22
CTC1-203ENST00000578240 MTMR3Q13615 1198 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 CA9Q16790 459 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 SPOCD1Q6ZMY3 1216 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 STRADAQ7RTN6 431 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 CCDC185Q8N715 623 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 PRELID2Q8N945 189 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 EDEM1Q92611 657 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 RNF25Q96BH1 459 aaPredicted RBP13.69□□□□□ -0.22
CTC1-203ENST00000578240 SEPT5Q99719 369 aaPredicted RBP13.69□□□□□ -0.22
CTC1-203ENST00000578240 ZBED2Q9BTP6 218 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 MAGEB5Q9BZ81 275 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 WDR6Q9NNW5 1121 aaKnown RBP13.69□□□□□ -0.22
CTC1-203ENST00000578240 PIGVQ9NUD9 493 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 GPATCH2LQ9NWQ4 482 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.69□□□□□ -0.22
CTC1-203ENST00000578240 PCDHB12Q9Y5F1 795 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 LRRD1A4D1F6 860 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 CARNS1A5YM72 827 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 CTSAP10619 480 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 DNAJB1P25685 340 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 EIF4EBP2Q13542 120 aaPredicted RBP13.69□□□□□ -0.22
CTC1-203ENST00000578240 LONRF2Q1L5Z9 754 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 MGAT5BQ3V5L5 792 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 ZC3H12AQ5D1E8 599 aaKnown RBP13.69□□□□□ -0.22
CTC1-203ENST00000578240 BSPRYQ5W0U4 402 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 KIAA1841Q6NSI8 718 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 TAC4Q86UU9 113 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 NUP93Q8N1F7 819 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 CMASQ8NFW8 434 aaPredicted RBP13.69□□□□□ -0.22
CTC1-203ENST00000578240 ADAM32Q8TC27 787 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 HDAC7Q8WUI4 952 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 SPATA17Q96L03 361 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 PNKPQ96T60 521 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 C17orf80Q9BSJ5 609 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 OSBPL8Q9BZF1 889 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 DDX47Q9H0S4 455 aaKnown RBP13.69□□□□□ -0.22
CTC1-203ENST00000578240 TMPRSS4Q9NRS4 437 aa13.69□□□□□ -0.22
CTC1-203ENST00000578240 AFF4Q9UHB7 1163 aaKnown RBP13.69□□□□□ -0.22
CTC1-203ENST00000578240 R3HDM2Q9Y2K5 976 aaKnown RBP13.69□□□□□ -0.22
CTC1-203ENST00000578240 SZT2Q5T011 3432 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 KRIT1O00522 736 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 MDM4O15151 490 aa13.68□□□□□ -0.22
CTC1-203ENST00000578240 TEX28O15482 410 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms