RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 DPEP3Q9H4B8 488 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 SMPD4Q9NXE4 827 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 CEP192Q8TEP8 1941 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 EXOC3O60645 756 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 AP1G2O75843 785 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 ABL1P00519 1130 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 ZNF445P59923 1031 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 RPL6Q02878 288 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 NCOA4Q13772 614 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 SCARA3Q6AZY7 606 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 IL27RAQ6UWB1 636 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 PAQR9Q6ZVX9 377 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 RAB44Q7Z6P3 723 aaPredicted RBP11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 ARHGAP18Q8N392 663 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 IPO4Q8TEX9 1081 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 ZCCHC14Q8WYQ9 949 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 HNRNPABQ99729 332 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 SCNM1Q9BWG6 230 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 SLC2A11Q9BYW1 496 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 NACA2Q9H009 215 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 FBRSQ9HAH7 460 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 CLIC5Q9NZA1 410 aa11.87□□□□□ -0.51
SMARCE1-214ENST00000578112 PATE3B3GLJ2 98 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 GIPC1O14908 333 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 GREM1O60565 184 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 IGLV3-19P01714 112 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 CYP2J2P51589 502 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 CACNA2D1P54289 1103 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 CACNA1BQ00975 2339 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 ZNF33AQ06730 810 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 INCA1Q0VD86 236 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 ENPP2Q13822 863 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 BBS7Q8IWZ6 715 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 FUKQ8N0W3 1084 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 UCMAQ8WVF2 138 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 GZF1Q9H116 711 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 KRT82Q9NSB4 513 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 GMIPQ9P107 970 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 KIAA1522Q9P206 1035 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 INVSQ9Y283 1065 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 A0A1W2PQF6 199 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 PDXKO00764 312 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 TIMM44O43615 452 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 TLR5O60602 858 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 FAM200BP0CF97 657 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 EIF4HQ15056 248 aaKnown RBP11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 UAP1L1Q3KQV9 507 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 ZACNQ401N2 412 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 Q6ZNB5 142 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 CCDC186Q7Z3E2 898 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 TMEFF1Q8IYR6 380 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 ADAMTS14Q8WXS8 1223 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 DNASE2BQ8WZ79 361 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 CCDC127Q96BQ5 260 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 TMEM30AQ9NV96 361 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 DNAJC17Q9NVM6 304 aaKnown RBP11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 CALCOCO1Q9P1Z2 691 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 NXF1Q9UBU9 619 aaKnown RBP11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 DNMT3LQ9UJW3 386 aa11.86□□□□□ -0.51
SMARCE1-214ENST00000578112 E9PAM4 449 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 NDUFS2O75306 463 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 GJB3O75712 270 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 CHKAP35790 457 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 PTGER3P43115 390 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 BIRC3Q13489 604 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 STARD3Q14849 445 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 ANO4Q32M45 955 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 PDILTQ8N807 584 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 TTC16Q8NEE8 873 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 DHX58Q96C10 678 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 SMOQ99835 787 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 SMYD3Q9H7B4 428 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 OSGEPQ9NPF4 335 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 USP36Q9P275 1121 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 DMDP11532 3685 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 A0A1B0GTW7 788 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 LRRIQ3A6PVS8 624 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 CLDN5O00501 218 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 ASS1P00966 412 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 PENKP01210 267 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 CISD3P0C7P0 127 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 RALAP11233 206 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 DGKGP49619 791 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 CDR1P51861 262 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 TTC30AQ86WT1 665 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 CPXM2Q8N436 756 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 ZMIZ2Q8NF64 920 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 IMPG2Q9BZV3 1241 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 CCSER2Q9H7U1 834 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 TMEM74BQ9NUR3 256 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 DKK4Q9UBT3 224 aa11.85□□□□□ -0.51
SMARCE1-214ENST00000578112 SRRM3A6NNA2 597 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 LATS1O95835 1130 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 CFIP05156 583 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 CD59P13987 128 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 TYRP14679 529 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 ITPKAP23677 461 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 CD6P30203 668 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 COG7P83436 770 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms