RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 DPYSL2Q16555 572 aa28.85■■■□□ 2.21
LIMD2-203ENST00000578067 RNASEH2BQ5TBB1 312 aaKnown RBP28.85■■■□□ 2.21
LIMD2-203ENST00000578067 DCLRE1AQ6PJP8 1040 aa28.85■■■□□ 2.21
LIMD2-203ENST00000578067 SLC24A5Q71RS6 500 aa28.85■■■□□ 2.21
LIMD2-203ENST00000578067 UNC45BQ8IWX7 931 aa28.85■■■□□ 2.21
LIMD2-203ENST00000578067 PQLC3Q8N755 202 aa28.85■■■□□ 2.21
LIMD2-203ENST00000578067 PLD5Q8N7P1 536 aa28.85■■■□□ 2.21
LIMD2-203ENST00000578067 PCDH19Q8TAB3 1148 aa28.85■■■□□ 2.21
LIMD2-203ENST00000578067 A6NNZ2 444 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 ACSL3O95573 720 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 L1CAMP32004 1257 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 NOS2P35228 1153 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 TUBB8Q3ZCM7 444 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 PPP6R3Q5H9R7 873 aaPredicted RBP28.84■■■□□ 2.21
LIMD2-203ENST00000578067 SLC9A4Q6AI14 798 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 PCGF5Q86SE9 256 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 ZNF296Q8WUU4 475 aaPredicted RBP28.84■■■□□ 2.21
LIMD2-203ENST00000578067 RSPH1Q8WYR4 309 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 PGM2Q96G03 612 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 AP4E1Q9UPM8 1137 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 TDRD15B5MCY1 1934 aaKnown RBP28.84■■■□□ 2.21
LIMD2-203ENST00000578067 ROR1Q01973 937 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 KYNUQ16719 465 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 DCAF6Q58WW2 860 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 C6orf118Q5T5N4 469 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 C1orf228Q6PIY5 440 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 GLB1LQ6UWU2 654 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 ARFGAP2Q8N6H7 521 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 ZMIZ2Q8NF64 920 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 HASPINQ8TF76 798 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 SMARCD1Q96GM5 515 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 DHX35Q9H5Z1 703 aaKnown RBP28.84■■■□□ 2.21
LIMD2-203ENST00000578067 NINJ2Q9NZG7 142 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 PHF24Q9UPV7 400 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 SHOC2Q9UQ13 582 aa28.84■■■□□ 2.21
LIMD2-203ENST00000578067 TLDC2A0PJX2 215 aa28.83■■■□□ 2.21
LIMD2-203ENST00000578067 STIP1P31948 543 aaKnown RBP28.83■■■□□ 2.21
LIMD2-203ENST00000578067 BCAR1P56945 870 aa28.83■■■□□ 2.21
LIMD2-203ENST00000578067 SKIDA1Q1XH10 827 aa28.83■■■□□ 2.21
LIMD2-203ENST00000578067 DARS2Q6PI48 645 aaKnown RBP28.83■■■□□ 2.21
LIMD2-203ENST00000578067 NT5C3BQ969T7 300 aa28.83■■■□□ 2.21
LIMD2-203ENST00000578067 TLCD1Q96CP7 247 aa28.83■■■□□ 2.21
LIMD2-203ENST00000578067 SLC2A13Q96QE2 648 aa28.83■■■□□ 2.21
LIMD2-203ENST00000578067 RBM15Q96T37 977 aaKnown RBP eCLIP28.83■■■□□ 2.21
LIMD2-203ENST00000578067 KCNK16Q96T55 309 aa28.83■■■□□ 2.21
LIMD2-203ENST00000578067 ROPN1BQ9BZX4 212 aaPredicted RBP28.83■■■□□ 2.21
LIMD2-203ENST00000578067 ROPN1Q9HAT0 212 aaPredicted RBP28.83■■■□□ 2.21
LIMD2-203ENST00000578067 HPDP32754 393 aaPredicted RBP28.82■■■□□ 2.2
LIMD2-203ENST00000578067 RPL22P35268 128 aaKnown RBP28.82■■■□□ 2.2
LIMD2-203ENST00000578067 FAM189BP81408 668 aa28.82■■■□□ 2.2
LIMD2-203ENST00000578067 RAB41Q5JT25 222 aa28.82■■■□□ 2.2
LIMD2-203ENST00000578067 FAM171BQ6P995 826 aa28.82■■■□□ 2.2
LIMD2-203ENST00000578067 ZC3H18Q86VM9 953 aaKnown RBP28.82■■■□□ 2.2
LIMD2-203ENST00000578067 CCDC185Q8N715 623 aa28.82■■■□□ 2.2
LIMD2-203ENST00000578067 FAM71DQ8N9W8 422 aa28.82■■■□□ 2.2
LIMD2-203ENST00000578067 NPY6RQ99463 290 aa28.82■■■□□ 2.2
LIMD2-203ENST00000578067 ULBP1Q9BZM6 244 aa28.82■■■□□ 2.2
LIMD2-203ENST00000578067 POPDC2Q9HBU9 364 aa28.82■■■□□ 2.2
LIMD2-203ENST00000578067 CALCOCO1Q9P1Z2 691 aa28.82■■■□□ 2.2
LIMD2-203ENST00000578067 STAP1Q9ULZ2 295 aa28.82■■■□□ 2.2
LIMD2-203ENST00000578067 ARHGEF37A1IGU5 675 aa28.82■■■□□ 2.2
LIMD2-203ENST00000578067 ACTN2P35609 894 aa28.82■■■□□ 2.2
LIMD2-203ENST00000578067 CACNA2D1P54289 1103 aa28.82■■■□□ 2.2
LIMD2-203ENST00000578067 INTS6LQ5JSJ4 861 aaKnown RBP28.82■■■□□ 2.2
LIMD2-203ENST00000578067 LINC01599Q8WXQ3 324 aa28.82■■■□□ 2.2
LIMD2-203ENST00000578067 MYLPFQ96A32 169 aa28.82■■■□□ 2.2
LIMD2-203ENST00000578067 SUSD3Q96L08 255 aa28.82■■■□□ 2.2
LIMD2-203ENST00000578067 CNGB3Q9NQW8 809 aa28.82■■■□□ 2.2
LIMD2-203ENST00000578067 ERICH4A6NGS2 130 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 KBTBD13C9JR72 458 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 RASGRF2O14827 1237 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 CYP2F1P24903 491 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 RDXP35241 583 aaKnown RBP28.81■■■□□ 2.2
LIMD2-203ENST00000578067 IRAK1P51617 712 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 DAOAP59103 153 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 MAGOHP61326 146 aaKnown RBP28.81■■■□□ 2.2
LIMD2-203ENST00000578067 LEKR1Q6ZMV7 388 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 CSNK1G1Q9HCP0 422 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 TMEM30AQ9NV96 361 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 MTMR10Q9NXD2 777 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 FARP1Q9Y4F1 1045 aaPredicted RBP28.81■■■□□ 2.2
LIMD2-203ENST00000578067 H7C0C1 242 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 NRP1O14786 923 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 YY1P25490 414 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 ATP5OP48047 213 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 CTCFP49711 727 aaPredicted RBP28.81■■■□□ 2.2
LIMD2-203ENST00000578067 RABGGTBP53611 331 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 GNGT1P63211 74 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 BNIPLQ7Z465 357 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 PPIL6Q8IXY8 311 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 EPS8L3Q8TE67 593 aaKnown RBP28.81■■■□□ 2.2
LIMD2-203ENST00000578067 PRCCQ92733 491 aaPredicted RBP28.81■■■□□ 2.2
LIMD2-203ENST00000578067 KCTD15Q96SI1 283 aaPredicted RBP28.81■■■□□ 2.2
LIMD2-203ENST00000578067 NRDE2Q9H7Z3 1164 aa28.81■■■□□ 2.2
LIMD2-203ENST00000578067 SMIM23A6NLE4 172 aa28.8■■■□□ 2.2
LIMD2-203ENST00000578067 HHLA1C9JL84 531 aa28.8■■■□□ 2.2
LIMD2-203ENST00000578067 RGS16O15492 202 aaPredicted RBP28.8■■■□□ 2.2
LIMD2-203ENST00000578067 MAGEA4P43358 317 aa28.8■■■□□ 2.2
LIMD2-203ENST00000578067 OTUD1Q5VV17 481 aaPredicted RBP28.8■■■□□ 2.2
LIMD2-203ENST00000578067 OVOS1Q6IE37 1185 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms