RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 GPR15P49685 360 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 TFDP3Q5H9I0 405 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 BSPRYQ5W0U4 402 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 TPGS2Q68CL5 300 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 SCYL2Q6P3W7 929 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 MFSD7Q6UXD7 560 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 ADAT2Q7Z6V5 191 aaKnown RBP19.37■□□□□ 0.69
PRKCA-203ENST00000578063 TTC9BQ8N6N2 239 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 ACSF2Q96CM8 615 aaPredicted RBP19.37■□□□□ 0.69
PRKCA-203ENST00000578063 CLSTN3Q9BQT9 956 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 RHOXF2Q9BQY4 288 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 ANKZF1Q9H8Y5 726 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 COMMD8Q9NX08 183 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 NAALADL1Q9UQQ1 740 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 SCML2Q9UQR0 700 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 SSX2IPQ9Y2D8 614 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 EFR3BQ9Y2G0 817 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 COL4A4P53420 1690 aaPredicted RBP19.36■□□□□ 0.69
PRKCA-203ENST00000578063 CCDC85CA6NKD9 419 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 PI4K2BG5E9Z4 385 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 PHF2O75151 1096 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 RPL17P18621 184 aaKnown RBP19.36■□□□□ 0.69
PRKCA-203ENST00000578063 KDELR1P24390 212 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 CDKN2BP42772 138 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 TUFMP49411 452 aaKnown RBP19.36■□□□□ 0.69
PRKCA-203ENST00000578063 DUSP4Q13115 394 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 KLF1Q13351 362 aaPredicted RBP19.36■□□□□ 0.69
PRKCA-203ENST00000578063 RAB6CQ53S08 254 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 RASIP1Q5U651 963 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 OTUD1Q5VV17 481 aaPredicted RBP19.36■□□□□ 0.69
PRKCA-203ENST00000578063 SYPL2Q5VXT5 272 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 DENND5BQ6ZUT9 1274 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 KLHL7Q8IXQ5 586 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 ARHGAP18Q8N392 663 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 KCTD6Q8NC69 237 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 HSPH1Q92598 858 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 RUBCNQ92622 972 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 PGAP3Q96FM1 320 aaPredicted RBP19.36■□□□□ 0.69
PRKCA-203ENST00000578063 RAB6CQ9H0N0 254 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 CRISPLD1Q9H336 500 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 MRPL17Q9NRX2 175 aaKnown RBP19.36■□□□□ 0.69
PRKCA-203ENST00000578063 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.36■□□□□ 0.69
PRKCA-203ENST00000578063 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.36■□□□□ 0.69
PRKCA-203ENST00000578063 IL37Q9NZH6 218 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 SLC27A5Q9Y2P5 690 aa19.36■□□□□ 0.69
PRKCA-203ENST00000578063 KIAA1671Q9BY89 1806 aa19.35■□□□□ 0.69
PRKCA-203ENST00000578063 hCG_1818297A0A087WSY0 165 aa19.35■□□□□ 0.69
PRKCA-203ENST00000578063 C3orf70A6NLC5 250 aaPredicted RBP19.35■□□□□ 0.69
PRKCA-203ENST00000578063 M0QYT0 321 aa19.35■□□□□ 0.69
PRKCA-203ENST00000578063 TJP3O95049 919 aa19.35■□□□□ 0.69
PRKCA-203ENST00000578063 YWHAGP61981 247 aaKnown RBP eCLIP19.35■□□□□ 0.69
PRKCA-203ENST00000578063 IFRD2Q12894 506 aaPredicted RBP19.35■□□□□ 0.69
PRKCA-203ENST00000578063 PDK2Q15119 407 aa19.35■□□□□ 0.69
PRKCA-203ENST00000578063 SIX1Q15475 284 aaPredicted RBP19.35■□□□□ 0.69
PRKCA-203ENST00000578063 TAZQ16635 292 aa19.35■□□□□ 0.69
PRKCA-203ENST00000578063 CYP1B1Q16678 543 aa19.35■□□□□ 0.69
PRKCA-203ENST00000578063 MAP7D3Q8IWC1 876 aa19.35■□□□□ 0.69
PRKCA-203ENST00000578063 PRELID2Q8N945 189 aa19.35■□□□□ 0.69
PRKCA-203ENST00000578063 ZNF461Q8TAF7 563 aa19.35■□□□□ 0.69
PRKCA-203ENST00000578063 RUNDC3BQ96NL0 473 aa19.35■□□□□ 0.69
PRKCA-203ENST00000578063 LRRC1Q9BTT6 524 aa19.35■□□□□ 0.69
PRKCA-203ENST00000578063 ADAM33Q9BZ11 813 aa19.35■□□□□ 0.69
PRKCA-203ENST00000578063 DDX47Q9H0S4 455 aaKnown RBP19.35■□□□□ 0.69
PRKCA-203ENST00000578063 ZBP1Q9H171 429 aa19.35■□□□□ 0.69
PRKCA-203ENST00000578063 ABCC13Q9NSE7 274 aa19.35■□□□□ 0.69
PRKCA-203ENST00000578063 RWDD3Q9Y3V2 267 aa19.35■□□□□ 0.69
PRKCA-203ENST00000578063 NR2E1Q9Y466 385 aa19.35■□□□□ 0.69
PRKCA-203ENST00000578063 TCRBV7S2A1N4TA0A589 114 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 FAM92AA1XBS5 289 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 ABLIM3O94929 683 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 CHRNA3P32297 505 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 DEUP1Q05D60 604 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 RAB33AQ14088 237 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 COL13A1Q5TAT6 717 aaPredicted RBP19.34■□□□□ 0.69
PRKCA-203ENST00000578063 SDHAF4Q5VUM1 108 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 MON1AQ86VX9 555 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 VSIG1Q86XK7 387 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 PSTKQ8IV42 348 aaKnown RBP19.34■□□□□ 0.69
PRKCA-203ENST00000578063 C12orf50Q8NA57 414 aaPredicted RBP19.34■□□□□ 0.69
PRKCA-203ENST00000578063 CCDC26Q8TAB7 109 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 SLC7A14Q8TBB6 771 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 SNRNP25Q9BV90 132 aaKnown RBP19.34■□□□□ 0.69
PRKCA-203ENST00000578063 HEMGNQ9BXL5 484 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 EPC1Q9H2F5 836 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 HOMER3Q9NSC5 361 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 FNIP2Q9P278 1114 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 F9P00740 461 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 CTSAP10619 480 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 ATF2P15336 505 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 MCM3P25205 808 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 CDH6P55285 790 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 KRT81Q14533 505 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 LLGL1Q15334 1064 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 ERMARDQ5T6L9 678 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 BTBD8Q5XKL5 378 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 ANKS1BQ7Z6G8 1248 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 ZDHHC14Q8IZN3 488 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 HERPUD2Q9BSE4 406 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 FAM204AQ9H8W3 233 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 CALCOCO1Q9P1Z2 691 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms