RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 STK32AQ8WU08 396 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 NDRG1Q92597 394 aaKnown RBP20.3■□□□□ 0.84
SS18-208ENST00000577751 CHFRQ96EP1 664 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 STK33Q9BYT3 514 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 NACA2Q9H009 215 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 LINC00597Q9H2U6 94 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 CFAP97Q9P2B7 532 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 RAPGEFL1Q9UHV5 662 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 PCDHGC3Q9UN70 934 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 MRPS17Q9Y2R5 130 aaKnown RBP20.3■□□□□ 0.84
SS18-208ENST00000577751 ARIH1Q9Y4X5 557 aaPredicted RBP20.3■□□□□ 0.84
SS18-208ENST00000577751 DCNP07585 359 aaKnown RBP20.29■□□□□ 0.84
SS18-208ENST00000577751 PNMA6AP0CW24 399 aaPredicted RBP20.29■□□□□ 0.84
SS18-208ENST00000577751 RALAP11233 206 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 IFNAR2P48551 515 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 RGS7P49802 495 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 KLK7P49862 253 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 DAOAP59103 153 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 RAPGEF1Q13905 1077 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 UBXN2BQ14CS0 331 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 ZSCAN23Q3MJ62 389 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 TADA2BQ86TJ2 420 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 SLC47A2Q86VL8 602 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 ADGRG2Q8IZP9 1017 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 SIX6OS1Q8N1H7 587 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 ATP2A3Q93084 1043 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 CLDN23Q96B33 292 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 ERGIC2Q96RQ1 377 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 CDK5RAP1Q96SZ6 601 aaKnown RBP20.29■□□□□ 0.84
SS18-208ENST00000577751 PRRX2Q99811 253 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 ECT2Q9H8V3 914 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 DNMT3LQ9UJW3 386 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 NUDT5Q9UKK9 219 aa20.29■□□□□ 0.84
SS18-208ENST00000577751 YJEFN3A6XGL0 299 aa20.28■□□□□ 0.84
SS18-208ENST00000577751 E7ENQ6 273 aa20.28■□□□□ 0.84
SS18-208ENST00000577751 LCP1P13796 627 aa20.28■□□□□ 0.84
SS18-208ENST00000577751 BPIFB4P59827 614 aa20.28■□□□□ 0.84
SS18-208ENST00000577751 SYCP1Q15431 976 aa20.28■□□□□ 0.84
SS18-208ENST00000577751 C10orf120Q5SQS8 335 aa20.28■□□□□ 0.84
SS18-208ENST00000577751 TXNDC11Q6PKC3 985 aa20.28■□□□□ 0.84
SS18-208ENST00000577751 WDTC1Q8N5D0 677 aa20.28■□□□□ 0.84
SS18-208ENST00000577751 IRGQQ8WZA9 623 aa20.28■□□□□ 0.84
SS18-208ENST00000577751 WBP2Q969T9 261 aa20.28■□□□□ 0.84
SS18-208ENST00000577751 SLC4A5Q9BY07 1137 aa20.28■□□□□ 0.84
SS18-208ENST00000577751 CYTH4Q9UIA0 394 aa20.28■□□□□ 0.84
SS18-208ENST00000577751 DAAM1Q9Y4D1 1078 aa20.28■□□□□ 0.84
SS18-208ENST00000577751 SLC9A3R1O14745 358 aaPredicted RBP20.27■□□□□ 0.84
SS18-208ENST00000577751 MDM4O15151 490 aa20.27■□□□□ 0.84
SS18-208ENST00000577751 EPHB6O15197 1021 aa20.27■□□□□ 0.84
SS18-208ENST00000577751 GREM1O60565 184 aa20.27■□□□□ 0.84
SS18-208ENST00000577751 UBXN1Q04323 297 aa20.27■□□□□ 0.84
SS18-208ENST00000577751 BSPRYQ5W0U4 402 aa20.27■□□□□ 0.84
SS18-208ENST00000577751 HTR3DQ70Z44 454 aa20.27■□□□□ 0.84
SS18-208ENST00000577751 TMEM110Q86TL2 294 aa20.27■□□□□ 0.84
SS18-208ENST00000577751 CPA6Q8N4T0 437 aa20.27■□□□□ 0.84
SS18-208ENST00000577751 LHX5Q9H2C1 402 aa20.27■□□□□ 0.84
SS18-208ENST00000577751 CBX8Q9HC52 389 aa20.27■□□□□ 0.84
SS18-208ENST00000577751 FAM207AQ9NSI2 230 aaPredicted RBP20.27■□□□□ 0.84
SS18-208ENST00000577751 TBC1D14Q9P2M4 693 aa20.27■□□□□ 0.84
SS18-208ENST00000577751 F8VZ95 297 aa20.26■□□□□ 0.83
SS18-208ENST00000577751 PIK3R2O00459 728 aa20.26■□□□□ 0.83
SS18-208ENST00000577751 NCAM2O15394 837 aa20.26■□□□□ 0.83
SS18-208ENST00000577751 GALR2O43603 387 aaPredicted RBP20.26■□□□□ 0.83
SS18-208ENST00000577751 FBXO21O94952 628 aa20.26■□□□□ 0.83
SS18-208ENST00000577751 CAVIN2O95810 425 aa20.26■□□□□ 0.83
SS18-208ENST00000577751 GJA4P35212 333 aa20.26■□□□□ 0.83
SS18-208ENST00000577751 ACADSBP45954 432 aa20.26■□□□□ 0.83
SS18-208ENST00000577751 RPS9P46781 194 aaKnown RBP20.26■□□□□ 0.83
SS18-208ENST00000577751 JAM2P57087 298 aa20.26■□□□□ 0.83
SS18-208ENST00000577751 POLR2FP61218 127 aaKnown RBP20.26■□□□□ 0.83
SS18-208ENST00000577751 BTBD8Q5XKL5 378 aa20.26■□□□□ 0.83
SS18-208ENST00000577751 DTWD2Q8NBA8 298 aa20.26■□□□□ 0.83
SS18-208ENST00000577751 PRSS33Q8NF86 280 aa20.26■□□□□ 0.83
SS18-208ENST00000577751 OTUB2Q96DC9 234 aa20.26■□□□□ 0.83
SS18-208ENST00000577751 RTN4Q9NQC3 1192 aaKnown RBP20.26■□□□□ 0.83
SS18-208ENST00000577751 ABCC13Q9NSE7 274 aa20.26■□□□□ 0.83
SS18-208ENST00000577751 NDRG2Q9UN36 371 aaKnown RBP20.26■□□□□ 0.83
SS18-208ENST00000577751 SH3BP1Q9Y3L3 701 aa20.26■□□□□ 0.83
SS18-208ENST00000577751 SCAMP3O14828 347 aaKnown RBP20.25■□□□□ 0.83
SS18-208ENST00000577751 NFATC1O95644 943 aa20.25■□□□□ 0.83
SS18-208ENST00000577751 CHRNB1P11230 501 aa20.25■□□□□ 0.83
SS18-208ENST00000577751 CYP11B1P15538 503 aa20.25■□□□□ 0.83
SS18-208ENST00000577751 MAGEA9P43362 315 aa20.25■□□□□ 0.83
SS18-208ENST00000577751 AMPD2Q01433 879 aa20.25■□□□□ 0.83
SS18-208ENST00000577751 NR1H3Q13133 447 aa20.25■□□□□ 0.83
SS18-208ENST00000577751 SCUBE3Q8IX30 993 aa20.25■□□□□ 0.83
SS18-208ENST00000577751 CLEC4CQ8WTT0 213 aa20.25■□□□□ 0.83
SS18-208ENST00000577751 ST7Q9NRC1 585 aa20.25■□□□□ 0.83
SS18-208ENST00000577751 WDFY4Q6ZS81 3184 aa20.25■□□□□ 0.83
SS18-208ENST00000577751 TRDMT1O14717 391 aaKnown RBP20.24■□□□□ 0.83
SS18-208ENST00000577751 STC2O76061 302 aa20.24■□□□□ 0.83
SS18-208ENST00000577751 IRF1P10914 325 aa20.24■□□□□ 0.83
SS18-208ENST00000577751 KRT9P35527 623 aa20.24■□□□□ 0.83
SS18-208ENST00000577751 COG7P83436 770 aa20.24■□□□□ 0.83
SS18-208ENST00000577751 GOLGA8FQ08AF8 430 aa20.24■□□□□ 0.83
SS18-208ENST00000577751 GOLGA8DPQ0D2H9 430 aa20.24■□□□□ 0.83
SS18-208ENST00000577751 EFEMP1Q12805 493 aa20.24■□□□□ 0.83
SS18-208ENST00000577751 TCF15Q12870 199 aa20.24■□□□□ 0.83
SS18-208ENST00000577751 PON2Q15165 354 aa20.24■□□□□ 0.83
SS18-208ENST00000577751 DHCR24Q15392 516 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms