RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 ADRA1BP35368 520 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 GSTM5P46439 218 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 CDK7P50613 346 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 CCT8P50990 548 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 HNRNPMP52272 730 aaKnown RBP eCLIP2.94□□□□□ -1.94
COPS3-213ENST00000577210 HMGA2P52926 109 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 TXNL4AP83876 142 aaKnown RBP2.94□□□□□ -1.94
COPS3-213ENST00000577210 FHL2Q14192 279 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 SPARCL1Q14515 664 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 KCNAB1Q14722 419 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 ACOX1Q15067 660 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 PFKFB4Q16877 469 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 PTCHD3Q3KNS1 767 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 STRIP1Q5VSL9 837 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 SLC9A4Q6AI14 798 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 SUMO4Q6EEV6 95 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 Q6ZWC4 215 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 PEG10Q86TG7 708 aaKnown RBP2.94□□□□□ -1.94
COPS3-213ENST00000577210 PNPLA1Q8N8W4 532 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 GLIS1Q8NBF1 620 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 VPS37AQ8NEZ2 397 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 TMEM171Q8WVE6 324 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 TFAP2BQ92481 460 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 R3HDM4Q96D70 268 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 FAR2Q96K12 515 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 UROC1Q96N76 676 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 FYTTD1Q96QD9 318 aaKnown RBP2.94□□□□□ -1.94
COPS3-213ENST00000577210 WDR24Q96S15 920 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 RMDN3Q96TC7 470 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 PRPF18Q99633 342 aaKnown RBP2.94□□□□□ -1.94
COPS3-213ENST00000577210 ARPC5LQ9BPX5 153 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 TTPALQ9BTX7 342 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 ISCA1Q9BUE6 129 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 FSD1LQ9BXM9 530 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 RNF26Q9BY78 433 aaPredicted RBP2.94□□□□□ -1.94
COPS3-213ENST00000577210 PCED1AQ9H1Q7 454 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 DUSP22Q9NRW4 184 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 MGAT4CQ9UBM8 478 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 VPS51Q9UID3 782 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 TLK1Q9UKI8 766 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 UBE2J1Q9Y385 318 aaPredicted RBP2.94□□□□□ -1.94
COPS3-213ENST00000577210 DTNAQ9Y4J8 743 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 SNX14Q9Y5W7 946 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 COL4A3Q01955 1670 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 PNMA6EA0A0J9YXQ4 647 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 H7C1Q1 480 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 OVOL3O00110 214 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 CES2O00748 559 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 IRAK2O43187 625 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 LARGE1O95461 756 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 RHOP08100 348 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 SLC3A2P08195 630 aaKnown RBP2.93□□□□□ -1.94
COPS3-213ENST00000577210 EBLN1P0CF75 366 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 HSD3B1P14060 373 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 HGFP14210 728 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 CYP2C18P33260 490 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 IL6STP40189 918 aaPredicted RBP2.93□□□□□ -1.94
COPS3-213ENST00000577210 ELF2Q15723 593 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 TBRG1Q3YBR2 411 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 CERKLQ49MI3 558 aaPredicted RBP2.93□□□□□ -1.94
COPS3-213ENST00000577210 GLE1Q53GS7 698 aaKnown RBP2.93□□□□□ -1.94
COPS3-213ENST00000577210 HSP90AB4PQ58FF6 505 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 PCID2Q5JVF3 399 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 ZNF569Q5MCW4 686 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 FAM83BQ5T0W9 1011 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 AKNAD1Q5T1N1 836 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 ANO1Q5XXA6 986 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 IGFL4Q6B9Z1 124 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 ABLIM2Q6H8Q1 611 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 TMED8Q6PL24 325 aaPredicted RBP2.93□□□□□ -1.94
COPS3-213ENST00000577210 KLHL17Q6TDP4 642 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 CLEC9AQ6UXN8 241 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 TSHZ1Q6ZSZ6 1077 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 MAVSQ7Z434 540 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 KCTD20Q7Z5Y7 419 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 VRK3Q8IV63 474 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 P3H2Q8IVL5 708 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 CCDC117Q8IWD4 279 aaPredicted RBP2.93□□□□□ -1.94
COPS3-213ENST00000577210 CLASRPQ8N2M8 674 aaKnown RBP2.93□□□□□ -1.94
COPS3-213ENST00000577210 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.93□□□□□ -1.94
COPS3-213ENST00000577210 FAM71DQ8N9W8 422 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 BEND2Q8NDZ0 799 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 SUN3Q8TAQ9 357 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 SDCCAG3Q96C92 435 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 DAZAP1Q96EP5 407 aaKnown RBP2.93□□□□□ -1.94
COPS3-213ENST00000577210 SCLT1Q96NL6 688 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 MYLK2Q9H1R3 596 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 TP63Q9H3D4 680 aaPredicted RBP2.93□□□□□ -1.94
COPS3-213ENST00000577210 SAYSD1Q9NPB0 183 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 FBXO28Q9NVF7 368 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 GAR1Q9NY12 217 aaKnown RBP2.93□□□□□ -1.94
COPS3-213ENST00000577210 DACT1Q9NYF0 836 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 DLL3Q9NYJ7 618 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 FOXJ2Q9P0K8 574 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 FNIP2Q9P278 1114 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 CDC23Q9UJX2 597 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 RIMKLBQ9ULI2 386 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 ADAMTS5Q9UNA0 930 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 SLC27A6Q9Y2P4 619 aa2.93□□□□□ -1.94
COPS3-213ENST00000577210 WNT6Q9Y6F9 365 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms