RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ANGPT1Q15389 498 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 CNGA2Q16280 664 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 STX1AQ16623 288 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 EXOC3L4Q17RC7 722 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 KLHL40Q2TBA0 621 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 ITPRIPL2Q3MIP1 535 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 HECTD3Q5T447 861 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 OTUD1Q5VV17 481 aaPredicted RBP9.13□□□□□ -0.95
SMG6-216ENST00000575176 RNF43Q68DV7 783 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 SMYD5Q6GMV2 418 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 DENND1BQ6P3S1 775 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 MAMSTRQ6ZN01 415 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 GBP6Q6ZN66 633 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 RALGPS2Q86X27 583 aaPredicted RBP9.13□□□□□ -0.95
SMG6-216ENST00000575176 BBS7Q8IWZ6 715 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 FAM217AQ8IXS0 508 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 FAM71AQ8IYT1 594 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 UBA3Q8TBC4 463 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 DDX1Q92499 740 aaKnown RBP9.13□□□□□ -0.95
SMG6-216ENST00000575176 FAM3CQ92520 227 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 ADAM33Q9BZ11 813 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 MFSD1Q9H3U5 465 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 FBXO44Q9H4M3 255 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 FAM86C1Q9NVL1 165 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 FANCLQ9NW38 375 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 EHD2Q9NZN4 543 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 CFAP97Q9P2B7 532 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 LIMA1Q9UHB6 759 aaKnown RBP9.13□□□□□ -0.95
SMG6-216ENST00000575176 NUDT5Q9UKK9 219 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 PCDHB4Q9Y5E5 795 aa9.13□□□□□ -0.95
SMG6-216ENST00000575176 EP300Q09472 2414 aaPredicted RBP9.13□□□□□ -0.95
SMG6-216ENST00000575176 CEP250Q9BV73 2442 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 CEP192Q8TEP8 1941 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 E2F8A0AVK6 867 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 LRRC10BA6NIK2 292 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 FAM170BA6NMN3 283 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 H0Y858 1186 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 K7ESF4 209 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 M0QYV0 167 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 STC2O76061 302 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 PAPSS2O95340 614 aaPredicted RBP9.12□□□□□ -0.95
SMG6-216ENST00000575176 FGFR1OPO95684 399 aaKnown RBP9.12□□□□□ -0.95
SMG6-216ENST00000575176 IGLV3-25P01717 112 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 IGLV3-27P01718 113 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 RARGP13631 454 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 CD19P15391 556 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 HOXD11P31277 338 aaPredicted RBP9.12□□□□□ -0.95
SMG6-216ENST00000575176 MTIF2P46199 727 aaKnown RBP9.12□□□□□ -0.95
SMG6-216ENST00000575176 TKTL1P51854 596 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 PTPN5P54829 565 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 YWHAEP62258 255 aaKnown RBP9.12□□□□□ -0.95
SMG6-216ENST00000575176 MYL5Q02045 173 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 UBXN2BQ14CS0 331 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 PON2Q15165 354 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 ARTNQ5T4W7 220 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 KLHDC7AQ5VTJ3 777 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 CAVIN1Q6NZI2 390 aaKnown RBP9.12□□□□□ -0.95
SMG6-216ENST00000575176 MSANTD2Q6P1R3 559 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 RHBDF2Q6PJF5 856 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 ZNF852Q6ZMS4 543 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 ADGRG2Q8IZP9 1017 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 ZNF606Q8WXB4 792 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 ATP2A3Q93084 1043 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 SHDQ96IW2 340 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 BPIFA3Q9BQP9 254 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 SLC4A5Q9BY07 1137 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 C8orf33Q9H7E9 229 aaPredicted RBP9.12□□□□□ -0.95
SMG6-216ENST00000575176 UBE2TQ9NPD8 197 aaPredicted RBP9.12□□□□□ -0.95
SMG6-216ENST00000575176 PLCB1Q9NQ66 1216 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 TLR8Q9NR97 1041 aaKnown RBP9.12□□□□□ -0.95
SMG6-216ENST00000575176 DUS2Q9NX74 493 aaKnown RBP9.12□□□□□ -0.95
SMG6-216ENST00000575176 DACH1Q9UI36 760 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 KIAA1257Q9ULG3 409 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 NDRG2Q9UN36 371 aaKnown RBP9.12□□□□□ -0.95
SMG6-216ENST00000575176 PCDHGC3Q9UN70 934 aa9.12□□□□□ -0.95
SMG6-216ENST00000575176 LGALS16A8MUM7 142 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 F8VZ95 297 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 FOXN3O00409 490 aaPredicted RBP9.11□□□□□ -0.95
SMG6-216ENST00000575176 MAN2B1O00754 1011 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 DPYSL4O14531 572 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 HOXC11O43248 304 aaPredicted RBP9.11□□□□□ -0.95
SMG6-216ENST00000575176 PAPSS1O43252 624 aaPredicted RBP9.11□□□□□ -0.95
SMG6-216ENST00000575176 LILRB5O75023 590 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 ZBED1O96006 694 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 EGFP01133 1207 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 MBL2P11226 248 aaPredicted RBP9.11□□□□□ -0.95
SMG6-216ENST00000575176 UCHL3P15374 230 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 GNA15P30679 374 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 CDH5P33151 784 aaPredicted RBP9.11□□□□□ -0.95
SMG6-216ENST00000575176 MAGEA9P43362 315 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 RGS7P49802 495 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 PDE6CP51160 858 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 YWHAGP61981 247 aaKnown RBP eCLIP9.11□□□□□ -0.95
SMG6-216ENST00000575176 PITX1P78337 314 aaPredicted RBP9.11□□□□□ -0.95
SMG6-216ENST00000575176 DMWDQ09019 674 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 PDCLQ13371 301 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 DHCR24Q15392 516 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 ANO6Q4KMQ2 910 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 HTR3DQ70Z44 454 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 ENOSF1Q7L5Y1 443 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms