RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 TRIB2Q92519 343 aa24.63■■□□□ 1.53
NPLOC4-217ENST00000574897 ZFYVE28Q9HCC9 887 aa24.63■■□□□ 1.53
NPLOC4-217ENST00000574897 MIOSQ9NXC5 875 aa24.63■■□□□ 1.53
NPLOC4-217ENST00000574897 MDM4O15151 490 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 DUSP11O75319 330 aaKnown RBP24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 CYP2F1P24903 491 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 L1CAMP32004 1257 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 MAGEA9P43362 315 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 PTPN9P43378 593 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 RPL34P49207 117 aaKnown RBP24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 NDUFV1P49821 464 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 TADA2BQ86TJ2 420 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 TRABD2AQ86V40 505 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 GAD1Q99259 594 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 TMPRSS4Q9NRS4 437 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 MTMR10Q9NXD2 777 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 GTF2IRD1Q9UHL9 959 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 RABGEF1Q9UJ41 708 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 TIMM13Q9Y5L4 95 aaPredicted RBP24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 TCP11X1B4DZS4 312 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 AVILO75366 819 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 GBE1Q04446 702 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 CENPIQ92674 756 aaPredicted RBP24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 ELAC2Q9BQ52 826 aaKnown RBP24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 AP4E1Q9UPM8 1137 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 CHMP2BQ9UQN3 213 aa24.62■■□□□ 1.53
NPLOC4-217ENST00000574897 E7ESA3 106 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 CHRNA1P02708 482 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 MYCNP04198 464 aaPredicted RBP24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 SLC10A3P09131 477 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 WARSP23381 471 aaKnown RBP24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 LRPAP1P30533 357 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 STIP1P31948 543 aaKnown RBP24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 SNX16P57768 344 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 SLC10A2Q12908 348 aaPredicted RBP24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 TAF2Q6P1X5 1199 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 DEFB106AQ8N104 65 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 FAM149B1Q96BN6 582 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 KCTD15Q96SI1 283 aaPredicted RBP24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 NRDE2Q9H7Z3 1164 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 ZMYND8Q9ULU4 1186 aaPredicted RBP24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 NR2E3Q9Y5X4 410 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 ATXN2Q99700 1313 aaKnown RBP24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 C3orf62Q6ZUJ4 267 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 FAM131BQ86XD5 332 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 C4orf33Q8N1A6 199 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 NETO2Q8NC67 525 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 TNIP3Q96KP6 325 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 ZNF670Q9BS34 389 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 RASSF4Q9H2L5 321 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 RAB6BQ9NRW1 208 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 FAM105AQ9NUU6 356 aa24.61■■□□□ 1.53
NPLOC4-217ENST00000574897 A0A1W2PPM1 405 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 CYBAP13498 195 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 KCNJ11Q14654 390 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 MDH1BQ5I0G3 518 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 AGGF1Q8N302 714 aaeCLIP24.6■■□□□ 1.532e-7■□□□□ 10.1
NPLOC4-217ENST00000574897 RIBC1Q8N443 379 aaPredicted RBP24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 TOP6BLQ8N6T0 577 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 C3orf58Q8NDZ4 430 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 FBF1Q8TES7 1133 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 FAF2Q96CS3 445 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 PAAF1Q9BRP4 392 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 MTG1Q9BT17 334 aaPredicted RBP24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 TSPYL2Q9H2G4 693 aaPredicted RBP24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 FGFR1OP2Q9NVK5 253 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 GGA2Q9UJY4 613 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 TRPV2Q9Y5S1 764 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 SYNJ2BP-COX16A0A087WUM0 186 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 XPO1O14980 1071 aaKnown RBP24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 PTPN1P18031 435 aaKnown RBP24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 KRT15P19012 456 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 TGM2P21980 687 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 RNASELQ05823 741 aaKnown RBP24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 DPYSL2Q16555 572 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 PIGWQ7Z7B1 504 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 MICALL1Q8N3F8 863 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 CCDC110Q8TBZ0 833 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 ETNK2Q9NVF9 386 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 COX16Q9P0S2 106 aa24.6■■□□□ 1.53
NPLOC4-217ENST00000574897 NDC80O14777 642 aa24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 ZBED1O96006 694 aa24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 ELK3P41970 407 aa24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 CLCNKBP51801 687 aa24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 TDRPQ86YL5 185 aa24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 PDIK1LQ8N165 341 aa24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 ATP11CQ8NB49 1132 aa24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 HSFY1Q96LI6 401 aa24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 HNRNPABQ99729 332 aaKnown RBP24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 DUSP16Q9BY84 665 aa24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 AGO3Q9H9G7 860 aaKnown RBP24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 TSC2P49815 1807 aa24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 FAM155AB1AL88 458 aaPredicted RBP24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 M0QZ92 97 aa24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 GJA9P57773 515 aa24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 EFHC2Q5JST6 749 aa24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 OTUD1Q5VV17 481 aaPredicted RBP24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 YTHDF3Q7Z739 585 aaKnown RBP24.59■■□□□ 1.53
NPLOC4-217ENST00000574897 CKAP2Q8WWK9 683 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms