RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 GAB3Q8WWW8 586 aa10.19□□□□□ -0.78
NPLOC4-216ENST00000574344 OTUB2Q96DC9 234 aa10.19□□□□□ -0.78
NPLOC4-216ENST00000574344 HEXIM2Q96MH2 286 aaKnown RBP10.19□□□□□ -0.78
NPLOC4-216ENST00000574344 PNKPQ96T60 521 aa10.19□□□□□ -0.78
NPLOC4-216ENST00000574344 HNRNPABQ99729 332 aaKnown RBP10.19□□□□□ -0.78
NPLOC4-216ENST00000574344 GTPBP4Q9BZE4 634 aaKnown RBP10.19□□□□□ -0.78
NPLOC4-216ENST00000574344 CSNK1G1Q9HCP0 422 aa10.19□□□□□ -0.78
NPLOC4-216ENST00000574344 PARD6AQ9NPB6 346 aa10.19□□□□□ -0.78
NPLOC4-216ENST00000574344 ARHGEF4Q9NR80 690 aa10.19□□□□□ -0.78
NPLOC4-216ENST00000574344 RAB20Q9NX57 234 aa10.19□□□□□ -0.78
NPLOC4-216ENST00000574344 LSM7Q9UK45 103 aaKnown RBP10.19□□□□□ -0.78
NPLOC4-216ENST00000574344 PCDHA5Q9Y5H7 936 aa10.19□□□□□ -0.78
NPLOC4-216ENST00000574344 PLXND1Q9Y4D7 1925 aa10.19□□□□□ -0.78
NPLOC4-216ENST00000574344 CCDC163A0A0D9SF12 145 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 FAM92AA1XBS5 289 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 PRR5-ARHGAP8B1AHC4 643 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 PSMA7O14818 248 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 LRP3O75074 770 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 ZDHHC11BP0C7U3 371 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 SDHBP21912 280 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 TIE1P35590 1138 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 ATP5C1P36542 298 aaKnown RBP10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 SLC6A11P48066 632 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 SLC8A3P57103 927 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 ARHGAP8P85298 464 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 FKBP3Q00688 224 aaKnown RBP10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 GAD2Q05329 585 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 LRRC63Q05C16 580 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 CCDC40Q4G0X9 1142 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 LY6G5CQ5SRR4 150 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 SNX30Q5VWJ9 437 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 ANKRD40Q6AI12 368 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 KLHL10Q6JEL2 608 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 SYT13Q7L8C5 426 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 CACNA2D4Q7Z3S7 1137 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 BBS7Q8IWZ6 715 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 ADGRG2Q8IZP9 1017 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 CCDC33Q8N5R6 958 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 KIAA1958Q8N8K9 716 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 NAT16Q8N8M0 369 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 EZH1Q92800 747 aaPredicted RBP10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 SEMA4DQ92854 862 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 ZFRQ96KR1 1074 aaKnown RBP10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 ARID3AQ99856 593 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 PNPLA8Q9NP80 782 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 CISHQ9NSE2 258 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 SEMA4GQ9NTN9 838 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 IL37Q9NZH6 218 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 ARMCX3Q9UH62 379 aaPredicted RBP10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 NAGPAQ9UK23 515 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 SCML2Q9UQR0 700 aa10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.18□□□□□ -0.78
NPLOC4-216ENST00000574344 DNAH14Q0VDD8 3507 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 A0A1W2PQH9 124 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 K7EQS6 105 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 MDM4O15151 490 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 CBFA2T2O43439 604 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 KAT7O95251 611 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 TBX18O95935 607 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 RARGP13631 454 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 GBP1P32455 592 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 EIF2DP41214 584 aaKnown RBP10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 ZNF75DP51815 510 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 PMS1P54277 932 aaKnown RBP10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 YWHAEP62258 255 aaKnown RBP10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 MYL5Q02045 173 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 ELF2Q15723 593 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 GAB4Q2WGN9 574 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 DPCR1Q3MIW9 517 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 PREPLQ4J6C6 727 aaPredicted RBP10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 AASDHQ4L235 1098 aaPredicted RBP10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 CBWD6Q4V339 395 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 COBLL1Q53SF7 1204 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 CBWD3Q5JTY5 395 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 CBWD5Q5RIA9 395 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 C10orf120Q5SQS8 335 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 ANO7Q6IWH7 933 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 RHBDF2Q6PJF5 856 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 PRR23CQ6ZRP0 262 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 NUDT18Q6ZVK8 323 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 TADA2BQ86TJ2 420 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 KBTBD6Q86V97 674 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 C12orf40Q86WS4 652 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 ABCA7Q8IZY2 2146 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 C12orf50Q8NA57 414 aaPredicted RBP10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 USP33Q8TEY7 942 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 WHAMMQ8TF30 809 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 TATDN2Q93075 761 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 TMEM176AQ96HP8 235 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 MRFAP1L1Q96HT8 127 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 DUSP16Q9BY84 665 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 TPSD1Q9BZJ3 242 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 ARRDC1-AS1Q9H2J1 176 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 SPHK2Q9NRA0 654 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 BCCIPQ9P287 314 aaKnown RBP eCLIP10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 RASAL2Q9UJF2 1139 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 NUDT5Q9UKK9 219 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 MMP17Q9ULZ9 603 aa10.17□□□□□ -0.78
NPLOC4-216ENST00000574344 LAMA1P25391 3075 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms