RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 ZFRQ96KR1 1074 aaKnown RBP12.94□□□□□ -0.34
PRPF8-208ENST00000573716 MRGPRX1Q96LB2 322 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 XPO6Q96QU8 1125 aaKnown RBP12.94□□□□□ -0.34
PRPF8-208ENST00000573716 BBS2Q9BXC9 721 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 ELOVL4Q9GZR5 314 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 TM7SF3Q9NS93 570 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 TMEM30AQ9NV96 361 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 INTS13Q9NVM9 706 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 FNDC3AQ9Y2H6 1198 aaKnown RBP12.94□□□□□ -0.34
PRPF8-208ENST00000573716 ASH1LQ9NR48 2969 aaKnown RBP12.94□□□□□ -0.34
PRPF8-208ENST00000573716 WASH3PC4AMC7 463 aa12.93□□□□□ -0.34
PRPF8-208ENST00000573716 PPP1R37O75864 691 aa12.93□□□□□ -0.34
PRPF8-208ENST00000573716 PRPF6O94906 941 aaKnown RBP12.93□□□□□ -0.34
PRPF8-208ENST00000573716 RTN3O95197 1032 aaPredicted RBP12.93□□□□□ -0.34
PRPF8-208ENST00000573716 IDEP14735 1019 aa12.93□□□□□ -0.34
PRPF8-208ENST00000573716 PTPN1P18031 435 aaKnown RBP12.93□□□□□ -0.34
PRPF8-208ENST00000573716 LONP1P36776 959 aaKnown RBP12.93□□□□□ -0.34
PRPF8-208ENST00000573716 CASP5P51878 434 aa12.93□□□□□ -0.34
PRPF8-208ENST00000573716 DUOXA2Q1HG44 320 aa12.93□□□□□ -0.34
PRPF8-208ENST00000573716 CACUL1Q86Y37 369 aa12.93□□□□□ -0.34
PRPF8-208ENST00000573716 SCAMP5Q8TAC9 235 aa12.93□□□□□ -0.34
PRPF8-208ENST00000573716 SNX19Q92543 992 aa12.93□□□□□ -0.34
PRPF8-208ENST00000573716 CDC6Q99741 560 aa12.93□□□□□ -0.34
PRPF8-208ENST00000573716 MED10Q9BTT4 135 aa12.93□□□□□ -0.34
PRPF8-208ENST00000573716 DPEP3Q9H4B8 488 aa12.93□□□□□ -0.34
PRPF8-208ENST00000573716 KIAA1522Q9P206 1035 aaPredicted RBP12.93□□□□□ -0.34
PRPF8-208ENST00000573716 STARD13Q9Y3M8 1113 aa12.93□□□□□ -0.34
PRPF8-208ENST00000573716 PCDHB13Q9Y5F0 798 aa12.93□□□□□ -0.34
PRPF8-208ENST00000573716 PRRT4C9JH25 899 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 BCAT2O15382 392 aaPredicted RBP12.92□□□□□ -0.34
PRPF8-208ENST00000573716 TYRP14679 529 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 GAP43P17677 238 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 ABCG1P45844 678 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 TNNC1P63316 161 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 STARD3Q14849 445 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 HLA-BQ31612 363 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 DCAF12L1Q5VU92 463 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 LIMS2Q7Z4I7 341 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 GPD1LQ8N335 351 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 GALNT15Q8N3T1 639 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 UBL7Q96S82 380 aaPredicted RBP12.92□□□□□ -0.34
PRPF8-208ENST00000573716 GABRG3Q99928 467 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 STRA6Q9BX79 667 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 B3GNT5Q9BYG0 378 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 TRIM9Q9C026 710 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 GMIPQ9P107 970 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 SEL1LQ9UBV2 794 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 EIF2B4Q9UI10 523 aaKnown RBP12.92□□□□□ -0.34
PRPF8-208ENST00000573716 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.92□□□□□ -0.34
PRPF8-208ENST00000573716 NME7Q9Y5B8 376 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 CELSR3Q9NYQ7 3312 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 MYH10P35580 1976 aa12.92□□□□□ -0.34
PRPF8-208ENST00000573716 ATP8B3O60423 1300 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 ZNF233A6NK53 670 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 A8MXQ7 604 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 DGKGP49619 791 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 IL27RAQ6UWB1 636 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 FAM124AQ86V42 546 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 CBWD2Q8IUF1 395 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 SCUBE3Q8IX30 993 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 B3GALNT2Q8NCR0 500 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 DNASE2BQ8WZ79 361 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 OVCA2Q8WZ82 227 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 SLC39A7Q92504 469 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 EPSTI1Q96J88 318 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 KCNK16Q96T55 309 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 FGFBP2Q9BYJ0 223 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 CD248Q9HCU0 757 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 TOR4AQ9NXH8 423 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 PLK2Q9NYY3 685 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 WDR35Q9P2L0 1181 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 DKK4Q9UBT3 224 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 BTBD3Q9Y2F9 522 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 STON1Q9Y6Q2 735 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 TMEM131Q92545 1883 aa12.91□□□□□ -0.34
PRPF8-208ENST00000573716 A0A1B0GVT2 93 aa12.9□□□□□ -0.34
PRPF8-208ENST00000573716 FLRT2O43155 660 aa12.9□□□□□ -0.34
PRPF8-208ENST00000573716 CACNG3O60359 315 aa12.9□□□□□ -0.34
PRPF8-208ENST00000573716 DLATP10515 647 aaKnown RBP12.9□□□□□ -0.34
PRPF8-208ENST00000573716 SLC5A3P53794 718 aa12.9□□□□□ -0.34
PRPF8-208ENST00000573716 BNC1Q01954 994 aa12.9□□□□□ -0.34
PRPF8-208ENST00000573716 WDR72Q3MJ13 1102 aa12.9□□□□□ -0.34
PRPF8-208ENST00000573716 FUT11Q495W5 492 aa12.9□□□□□ -0.34
PRPF8-208ENST00000573716 USP49Q70CQ1 688 aa12.9□□□□□ -0.34
PRPF8-208ENST00000573716 TRAPPC11Q7Z392 1133 aa12.9□□□□□ -0.34
PRPF8-208ENST00000573716 KIF2CQ99661 725 aa12.9□□□□□ -0.34
PRPF8-208ENST00000573716 WSB2Q9NYS7 404 aaPredicted RBP12.9□□□□□ -0.34
PRPF8-208ENST00000573716 NXF1Q9UBU9 619 aaKnown RBP12.9□□□□□ -0.34
PRPF8-208ENST00000573716 CCDC39Q9UFE4 941 aa12.9□□□□□ -0.34
PRPF8-208ENST00000573716 LSM7Q9UK45 103 aaKnown RBP12.9□□□□□ -0.34
PRPF8-208ENST00000573716 A0A087WV48 116 aa12.89□□□□□ -0.35
PRPF8-208ENST00000573716 KCNJ18B7U540 433 aa12.89□□□□□ -0.35
PRPF8-208ENST00000573716 SYNCRIPO60506 623 aaKnown RBP12.89□□□□□ -0.35
PRPF8-208ENST00000573716 TLR5O60602 858 aa12.89□□□□□ -0.35
PRPF8-208ENST00000573716 EIF5BO60841 1220 aaKnown RBP12.89□□□□□ -0.35
PRPF8-208ENST00000573716 TBX18O95935 607 aa12.89□□□□□ -0.35
PRPF8-208ENST00000573716 ZNF883P0CG24 379 aa12.89□□□□□ -0.35
PRPF8-208ENST00000573716 ACADMP11310 421 aa12.89□□□□□ -0.35
PRPF8-208ENST00000573716 TNNI1P19237 187 aa12.89□□□□□ -0.35
PRPF8-208ENST00000573716 ITPKBP27987 946 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms