RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 ACTRT1Q8TDG2 376 aa10.06□□□□□ -0.8
NDE1-208ENST00000573694 AP1M1Q9BXS5 423 aa10.06□□□□□ -0.8
NDE1-208ENST00000573694 GPR62Q9BZJ7 368 aa10.06□□□□□ -0.8
NDE1-208ENST00000573694 CARD9Q9H257 536 aa10.06□□□□□ -0.8
NDE1-208ENST00000573694 SEMA4AQ9H3S1 761 aa10.06□□□□□ -0.8
NDE1-208ENST00000573694 MRPL47Q9HD33 250 aaKnown RBP10.06□□□□□ -0.8
NDE1-208ENST00000573694 MAN1C1Q9NR34 630 aa10.06□□□□□ -0.8
NDE1-208ENST00000573694 RNF14Q9UBS8 474 aa10.06□□□□□ -0.8
NDE1-208ENST00000573694 KIAA1257Q9ULG3 409 aa10.06□□□□□ -0.8
NDE1-208ENST00000573694 STRIP2Q9ULQ0 834 aa10.06□□□□□ -0.8
NDE1-208ENST00000573694 PRG3Q9Y2Y8 225 aaPredicted RBP10.06□□□□□ -0.8
NDE1-208ENST00000573694 TIMM13Q9Y5L4 95 aaPredicted RBP10.06□□□□□ -0.8
NDE1-208ENST00000573694 CCDC66A2RUB6 948 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 FAM86C2PA6NEL3 165 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 C2CD4DB7Z1M9 353 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 CLDN5O00501 218 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 TGM5O43548 720 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 SEC31AO94979 1220 aaKnown RBP10.05□□□□□ -0.8
NDE1-208ENST00000573694 FGGP02679 453 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 PYGMP11217 842 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 MAN1A1P33908 653 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 GABRB2P47870 512 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 AARSP49588 968 aaKnown RBP eCLIP10.05□□□□□ -0.8
NDE1-208ENST00000573694 VSNL1P62760 191 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 PDE4CQ08493 712 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 KCTD19Q17RG1 926 aaPredicted RBP10.05□□□□□ -0.8
NDE1-208ENST00000573694 MDH1BQ5I0G3 518 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 FAM102AQ5T9C2 384 aaPredicted RBP10.05□□□□□ -0.8
NDE1-208ENST00000573694 SEL1L2Q5TEA6 688 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 SLC8B1Q6J4K2 584 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 TRNP1Q6NT89 227 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 PMF1Q6P1K2 205 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 DCUN1D2Q6PH85 259 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 RSPO2Q6UXX9 243 aaPredicted RBP10.05□□□□□ -0.8
NDE1-208ENST00000573694 TMC5Q6UXY8 1006 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 DSTYKQ6XUX3 929 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 MTSS1LQ765P7 747 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 ADAT2Q7Z6V5 191 aaKnown RBP10.05□□□□□ -0.8
NDE1-208ENST00000573694 KLHL7Q8IXQ5 586 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 CRYBG2Q8N1P7 616 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 EMC1Q8N766 993 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 B3GALNT2Q8NCR0 500 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 ZNF461Q8TAF7 563 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 SLC2A14Q8TDB8 520 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 IPO4Q8TEX9 1081 aaKnown RBP10.05□□□□□ -0.8
NDE1-208ENST00000573694 RIN2Q8WYP3 895 aaPredicted RBP10.05□□□□□ -0.8
NDE1-208ENST00000573694 SMG7Q92540 1137 aaKnown RBP10.05□□□□□ -0.8
NDE1-208ENST00000573694 C18orf8Q96DM3 657 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 KRT12Q99456 494 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 SYT15Q9BQS2 421 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 HERPUD2Q9BSE4 406 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 LRRC1Q9BTT6 524 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 SYNCQ9H7C4 482 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 CRTAC1Q9NQ79 661 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 ST7Q9NRC1 585 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 KLHL11Q9NVR0 708 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 HSFX1Q9UBD0 423 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 MTRRQ9UBK8 725 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 HESX1Q9UBX0 185 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 TMEM59LQ9UK28 342 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 FBXW11Q9UKB1 542 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 DUSP12Q9UNI6 340 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 PCDHA3Q9Y5H8 950 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 CLUHO75153 1309 aa10.05□□□□□ -0.8
NDE1-208ENST00000573694 TCRBV7S2A1N4TA0A589 114 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 PROB1E7EW31 1015 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 ANHXE9PGG2 379 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 F8VP50 259 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 GABRDO14764 452 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 B3GAT3O94766 335 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 SETSIPP0DME0 302 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 PTPN1P18031 435 aaKnown RBP10.04□□□□□ -0.8
NDE1-208ENST00000573694 PSMA2P25787 234 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 SLC1A1P43005 524 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 SSR1P43307 286 aaKnown RBP10.04□□□□□ -0.8
NDE1-208ENST00000573694 MAGEA9P43362 315 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 BCAT1P54687 386 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 RWDD2BP57060 319 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 SLC7A5Q01650 507 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 BST2Q10589 180 aaKnown RBP10.04□□□□□ -0.8
NDE1-208ENST00000573694 SMARCB1Q12824 385 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 ZNF268Q14587 947 aaPredicted RBP10.04□□□□□ -0.8
NDE1-208ENST00000573694 LLGL1Q15334 1064 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 PSMD5Q16401 504 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 LONRF2Q1L5Z9 754 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 FAM171A1Q5VUB5 890 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 TXNRD3NBQ6F5E7 133 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 ASTLQ6HA08 431 aaPredicted RBP10.04□□□□□ -0.8
NDE1-208ENST00000573694 OR6B2Q6IFH4 312 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 C8orf74Q6P047 294 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 GSPT2Q8IYD1 628 aaKnown RBP10.04□□□□□ -0.8
NDE1-208ENST00000573694 FUKQ8N0W3 1084 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 CLEC4CQ8WTT0 213 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 AUTS2Q8WXX7 1259 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 MCRS1Q96EZ8 462 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 SHDQ96IW2 340 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 HINFPQ9BQA5 517 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 CLSTN3Q9BQT9 956 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 SLC4A5Q9BY07 1137 aa10.04□□□□□ -0.8
NDE1-208ENST00000573694 OSBPL6Q9BZF3 934 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms