RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 TRPM5Q9NZQ8 1165 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 APEX2Q9UBZ4 518 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 NFE2L3Q9Y4A8 694 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 CPQQ9Y646 472 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 WNT6Q9Y6F9 365 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 SPTBN4Q9H254 2564 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 RIF1Q5UIP0 2472 aaKnown RBP9.15□□□□□ -0.94
SMG6-210ENST00000572205 A0A1W2PQH9 124 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 GFRA2O00451 464 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 SCAMP3O14828 347 aaKnown RBP9.15□□□□□ -0.94
SMG6-210ENST00000572205 ZNF263O14978 683 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 XPO1O14980 1071 aaKnown RBP9.15□□□□□ -0.94
SMG6-210ENST00000572205 MDM4O15151 490 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 TLR5O60602 858 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 TBX18O95935 607 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 MBD3O95983 291 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 CYP17A1P05093 508 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 CKMP06732 381 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 OPRD1P41143 372 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 RPS9P46781 194 aaKnown RBP9.15□□□□□ -0.94
SMG6-210ENST00000572205 PPP3CCP48454 512 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 BCAT1P54687 386 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 IFRD2Q12894 506 aaPredicted RBP9.15□□□□□ -0.94
SMG6-210ENST00000572205 KRT31Q15323 416 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 MEA1Q16626 185 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 TCP11X2Q5H9J9 407 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 FSTL4Q6MZW2 842 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 PMF1Q6P1K2 205 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 KLHDC10Q6PID8 442 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 TMEM270Q6UE05 265 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 Q6ZNB5 142 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 Q6ZS52 159 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 C12orf40Q86WS4 652 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 SFTPA1Q8IWL2 248 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 SCML4Q8N228 414 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 DTWD2Q8NBA8 298 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 PDZD8Q8NEN9 1154 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 EPS8L1Q8TE68 723 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 NDRG1Q92597 394 aaKnown RBP9.15□□□□□ -0.94
SMG6-210ENST00000572205 JAKMIP2Q96AA8 810 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 PIWIL1Q96J94 861 aaKnown RBP9.15□□□□□ -0.94
SMG6-210ENST00000572205 SLITRK1Q96PX8 696 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 KLF16Q9BXK1 252 aaPredicted RBP9.15□□□□□ -0.94
SMG6-210ENST00000572205 UBXN6Q9BZV1 441 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 LINC00597Q9H2U6 94 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 CHRDQ9H2X0 955 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 NDST4Q9H3R1 872 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 EBF3Q9H4W6 596 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 TJP2Q9UDY2 1190 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 LHX6Q9UPM6 363 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 SIK3Q9Y2K2 1263 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 HCN4Q9Y3Q4 1203 aa9.15□□□□□ -0.94
SMG6-210ENST00000572205 FAM186AA6NE01 2351 aa9.15□□□□□ -0.95
SMG6-210ENST00000572205 DOCK4Q8N1I0 1966 aa9.15□□□□□ -0.95
SMG6-210ENST00000572205 CHD5Q8TDI0 1954 aa9.15□□□□□ -0.95
SMG6-210ENST00000572205 KCNJ18B7U540 433 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 FYNP06241 537 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 VDRP11473 427 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 HDCP19113 662 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 EEF1GP26641 437 aaKnown RBP9.14□□□□□ -0.95
SMG6-210ENST00000572205 GJA4P35212 333 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 GPD2P43304 727 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 GCGRP47871 477 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 KLK7P49862 253 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 TYRO3Q06418 890 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 BST2Q10589 180 aaKnown RBP9.14□□□□□ -0.95
SMG6-210ENST00000572205 RUNX3Q13761 415 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 KCNJ12Q14500 433 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 TAF12Q16514 161 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 VWA3BQ502W6 1294 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 SGO2Q562F6 1265 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 TMEM196Q5HYL7 178 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 DHX40Q8IX18 779 aaKnown RBP9.14□□□□□ -0.95
SMG6-210ENST00000572205 ETFBKMTQ8IXQ9 262 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 WDTC1Q8N5D0 677 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 CCDC150Q8NCX0 1101 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 TTC8Q8TAM2 541 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 CLEC4CQ8WTT0 213 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 KCTD13Q8WZ19 329 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 SECISBP2LQ93073 1101 aaKnown RBP9.14□□□□□ -0.95
SMG6-210ENST00000572205 MSANTD3Q96H12 275 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 HEXIM2Q96MH2 286 aaKnown RBP9.14□□□□□ -0.95
SMG6-210ENST00000572205 TUBGCP2Q9BSJ2 902 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 ULBP1Q9BZM6 244 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 ECT2Q9H8V3 914 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 GKN1Q9NS71 199 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 RBM12Q9NTZ6 932 aaKnown RBP9.14□□□□□ -0.95
SMG6-210ENST00000572205 SMPD4Q9NXE4 827 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 TAB2Q9NYJ8 693 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 CLIC5Q9NZA1 410 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 CHORDC1Q9UHD1 332 aaPredicted RBP9.14□□□□□ -0.95
SMG6-210ENST00000572205 HCN2Q9UL51 889 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 SIT1Q9Y3P8 196 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 FHOD1Q9Y613 1164 aa9.14□□□□□ -0.95
SMG6-210ENST00000572205 CACNA1AO00555 2505 aa9.13□□□□□ -0.95
SMG6-210ENST00000572205 YJEFN3A6XGL0 299 aa9.13□□□□□ -0.95
SMG6-210ENST00000572205 CFAP99D6REC4 459 aa9.13□□□□□ -0.95
SMG6-210ENST00000572205 E7ENQ6 273 aa9.13□□□□□ -0.95
SMG6-210ENST00000572205 PROB1E7EW31 1015 aa9.13□□□□□ -0.95
SMG6-210ENST00000572205 TRDMT1O14717 391 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms