RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 CELSR3Q9NYQ7 3312 aa20.32■□□□□ 0.84
NUP88-203ENST00000572019 ITPR1Q14643 2758 aa20.32■□□□□ 0.84
NUP88-203ENST00000572019 FAM92AA1XBS5 289 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 WASH3PC4AMC7 463 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 ARHGAP33O14559 1287 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 EIF3DO15371 548 aaKnown RBP eCLIP20.31■□□□□ 0.84
NUP88-203ENST00000572019 SH3BP5O60239 455 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 OPHN1O60890 802 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 GJB3O75712 270 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 CCDC130P13994 396 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 ATXN3P54252 364 aaPredicted RBP20.31■□□□□ 0.84
NUP88-203ENST00000572019 BYSLQ13895 437 aaKnown RBP20.31■□□□□ 0.84
NUP88-203ENST00000572019 NUMA1Q14980 2115 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 FAM26FQ5R3K3 315 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 BTBD8Q5XKL5 378 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 GPRIN1Q7Z2K8 1008 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 ACOT1Q86TX2 421 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 HDDC3Q8N4P3 179 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 PDZD8Q8NEN9 1154 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 MED10Q9BTT4 135 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 KLF16Q9BXK1 252 aaPredicted RBP20.31■□□□□ 0.84
NUP88-203ENST00000572019 TNMDQ9H2S6 317 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 KIAA1586Q9HCI6 787 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 KRT82Q9NSB4 513 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 MTMR6Q9Y217 621 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 STARD13Q9Y3M8 1113 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 KNL1Q8NG31 2342 aa20.31■□□□□ 0.84
NUP88-203ENST00000572019 FAM221BA6H8Z2 402 aa20.3■□□□□ 0.84
NUP88-203ENST00000572019 NEDD8-MDP1E9PL57 170 aa20.3■□□□□ 0.84
NUP88-203ENST00000572019 MDM4O15151 490 aa20.3■□□□□ 0.84
NUP88-203ENST00000572019 STAU1O95793 577 aaKnown RBP20.3■□□□□ 0.84
NUP88-203ENST00000572019 FAM163BP0C2L3 166 aa20.3■□□□□ 0.84
NUP88-203ENST00000572019 TUBP50607 506 aa20.3■□□□□ 0.84
NUP88-203ENST00000572019 ASIC1P78348 528 aa20.3■□□□□ 0.84
NUP88-203ENST00000572019 EHHADHQ08426 723 aa20.3■□□□□ 0.84
NUP88-203ENST00000572019 GRAMD4Q6IC98 578 aa20.3■□□□□ 0.84
NUP88-203ENST00000572019 SLC36A4Q6YBV0 504 aa20.3■□□□□ 0.84
NUP88-203ENST00000572019 TPGS1Q6ZTW0 290 aa20.3■□□□□ 0.84
NUP88-203ENST00000572019 PNPLA1Q8N8W4 532 aa20.3■□□□□ 0.84
NUP88-203ENST00000572019 XXYLT1Q8NBI6 393 aa20.3■□□□□ 0.84
NUP88-203ENST00000572019 CEP76Q8TAP6 659 aa20.3■□□□□ 0.84
NUP88-203ENST00000572019 KCNV2Q8TDN2 545 aa20.3■□□□□ 0.84
NUP88-203ENST00000572019 DHX58Q96C10 678 aa20.3■□□□□ 0.84
NUP88-203ENST00000572019 DMAP1Q9NPF5 467 aaPredicted RBP20.3■□□□□ 0.84
NUP88-203ENST00000572019 DNAAF2Q9NVR5 837 aaKnown RBP20.3■□□□□ 0.84
NUP88-203ENST00000572019 CACNA2D2Q9NY47 1150 aa20.3■□□□□ 0.84
NUP88-203ENST00000572019 MORC2Q9Y6X9 1032 aaPredicted RBP20.3■□□□□ 0.84
NUP88-203ENST00000572019 TMEM131Q92545 1883 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 APC2O95996 2303 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 CACNG3O60359 315 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 TLR5O60602 858 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 AP1G2O75843 785 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 VNN1O95497 513 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 TYRP14679 529 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 TRPC3Q13507 836 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 STXBP4Q6ZWJ1 553 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 TRMT11Q7Z4G4 463 aaKnown RBP20.29■□□□□ 0.84
NUP88-203ENST00000572019 CHPFQ8IZ52 775 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 BHMTQ93088 406 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 SMARCD1Q96GM5 515 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 MRGPRX1Q96LB2 322 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 GABRG3Q99928 467 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 DUSP9Q99956 384 aaKnown RBP20.29■□□□□ 0.84
NUP88-203ENST00000572019 BBS2Q9BXC9 721 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 NUDT5Q9UKK9 219 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 CKAP5Q14008 2032 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 LOC400499M0QZD8 3231 aa20.29■□□□□ 0.84
NUP88-203ENST00000572019 CISD3P0C7P0 127 aa20.28■□□□□ 0.84
NUP88-203ENST00000572019 DPP6P42658 865 aa20.28■□□□□ 0.84
NUP88-203ENST00000572019 NASPP49321 788 aaPredicted RBP20.28■□□□□ 0.84
NUP88-203ENST00000572019 C19orf48Q6RUI8 117 aa20.28■□□□□ 0.84
NUP88-203ENST00000572019 HTR3DQ70Z44 454 aa20.28■□□□□ 0.84
NUP88-203ENST00000572019 PROSER1Q86XN7 944 aa20.28■□□□□ 0.84
NUP88-203ENST00000572019 C12orf29Q8N999 325 aa20.28■□□□□ 0.84
NUP88-203ENST00000572019 ZNF419Q96HQ0 510 aaPredicted RBP20.28■□□□□ 0.84
NUP88-203ENST00000572019 BLZF1Q9H2G9 400 aa20.28■□□□□ 0.84
NUP88-203ENST00000572019 PLK2Q9NYY3 685 aa20.28■□□□□ 0.84
NUP88-203ENST00000572019 ACACAQ13085 2346 aa20.28■□□□□ 0.84
NUP88-203ENST00000572019 LRRIQ3A6PVS8 624 aaPredicted RBP20.27■□□□□ 0.84
NUP88-203ENST00000572019 ATICP31939 592 aa20.27■□□□□ 0.84
NUP88-203ENST00000572019 MAP3K7CLP57077 242 aa20.27■□□□□ 0.84
NUP88-203ENST00000572019 SCAPQ12770 1279 aa20.27■□□□□ 0.84
NUP88-203ENST00000572019 ACAP1Q15027 740 aa20.27■□□□□ 0.84
NUP88-203ENST00000572019 ZNF699Q32M78 642 aa20.27■□□□□ 0.84
NUP88-203ENST00000572019 PLEKHG6Q3KR16 790 aa20.27■□□□□ 0.84
NUP88-203ENST00000572019 SHC4Q6S5L8 630 aa20.27■□□□□ 0.84
NUP88-203ENST00000572019 LINC00301Q8NCQ3 95 aa20.27■□□□□ 0.84
NUP88-203ENST00000572019 SLC2A14Q8TDB8 520 aa20.27■□□□□ 0.84
NUP88-203ENST00000572019 SYAP1Q96A49 352 aaPredicted RBP20.27■□□□□ 0.84
NUP88-203ENST00000572019 NACA2Q9H009 215 aa20.27■□□□□ 0.84
NUP88-203ENST00000572019 VRTNQ9H8Y1 702 aa20.27■□□□□ 0.84
NUP88-203ENST00000572019 NMUR1Q9HB89 426 aa20.27■□□□□ 0.84
NUP88-203ENST00000572019 FOXD4L1Q9NU39 408 aa20.27■□□□□ 0.84
NUP88-203ENST00000572019 FAM49BQ9NUQ9 324 aa20.27■□□□□ 0.84
NUP88-203ENST00000572019 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.26■□□□□ 0.83
NUP88-203ENST00000572019 A0A1W2PQD8 194 aa20.26■□□□□ 0.83
NUP88-203ENST00000572019 HHLA1C9JL84 531 aa20.26■□□□□ 0.83
NUP88-203ENST00000572019 CYP26A1O43174 497 aa20.26■□□□□ 0.83
NUP88-203ENST00000572019 PHACTR2O75167 634 aa20.26■□□□□ 0.83
NUP88-203ENST00000572019 C4BPAP04003 597 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms