RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 ADGRG2Q8IZP9 1017 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 CAMKK1Q8N5S9 505 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 SPATA20Q8TB22 786 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 EZH1Q92800 747 aaPredicted RBP13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 SEMA4DQ92854 862 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 OTUB2Q96DC9 234 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 HHIPQ96QV1 700 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 CISHQ9NSE2 258 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 SCML2Q9UQR0 700 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 CEP250Q9BV73 2442 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 TRIM49BA6NDI0 452 aa13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 RPP40O75818 363 aaKnown RBP13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 APBB3O95704 486 aa13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 CCDC192P0DO97 292 aa13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 HOXC13P31276 330 aa13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 EIF2DP41214 584 aaKnown RBP13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 PMS1P54277 932 aaKnown RBP13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 SEC13P55735 322 aa13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 MCCD1P59942 119 aaPredicted RBP13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 DMC1Q14565 340 aa13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 GAB4Q2WGN9 574 aa13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 CBWD6Q4V339 395 aa13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 CBWD3Q5JTY5 395 aa13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 CBWD5Q5RIA9 395 aa13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 ANKRD40Q6AI12 368 aa13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 ZC3H3Q8IXZ2 948 aaKnown RBP13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 WHAMMQ8TF30 809 aa13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 GAB3Q8WWW8 586 aa13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 HEXIM2Q96MH2 286 aaKnown RBP13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 ARID3AQ99856 593 aa13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 FAM124BQ9H5Z6 455 aaPredicted RBP13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 CYLDQ9NQC7 956 aa13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 POLR3BQ9NW08 1133 aaPredicted RBP13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 ARMCX3Q9UH62 379 aaPredicted RBP13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 CACNA1AO00555 2505 aa13.04□□□□□ -0.32
CTDNEP1-205ENST00000570828 PRR5-ARHGAP8B1AHC4 643 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 HHLA1C9JL84 531 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 AXIN1O15169 862 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 LRP3O75074 770 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 ATP5C1P36542 298 aaKnown RBP13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 PPP1R2P41236 205 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 PGFP49763 221 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 SLC8A3P57103 927 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 ARHGAP8P85298 464 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 GAD2Q05329 585 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 SPEM2Q0P670 501 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 PUM1Q14671 1186 aaKnown RBP eCLIP13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 C2orf27AQ580R0 203 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 LY6G5CQ5SRR4 150 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 PPP1R26Q5T8A7 1209 aaPredicted RBP13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 BTBD8Q5XKL5 378 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 RHBDF2Q6PJF5 856 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 DGLUCYQ7Z3D6 616 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 TADA2BQ86TJ2 420 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 FAM160A2Q8N612 972 aaPredicted RBP13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 TSTD1Q8NFU3 115 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 USP33Q8TEY7 942 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 TMEM176AQ96HP8 235 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 PNKPQ96T60 521 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 DUSP9Q99956 384 aaKnown RBP13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 DUSP16Q9BY84 665 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 PARD6AQ9NPB6 346 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 LSM7Q9UK45 103 aaKnown RBP13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 MAN1B1Q9UKM7 699 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 GREB1Q4ZG55 1949 aa13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 ZNF638Q14966 1978 aaKnown RBP13.03□□□□□ -0.32
CTDNEP1-205ENST00000570828 A0A1W2PQH9 124 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 K7EQS6 105 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 KAT7O95251 611 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 TBX18O95935 607 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 APODP05090 189 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 SDHBP21912 280 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 KIF11P52732 1056 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 YWHAEP62258 255 aaKnown RBP13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 KDSRQ06136 332 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 CUL2Q13617 745 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 RSPO4Q2I0M5 234 aaPredicted RBP13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 ANO4Q32M45 955 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 CCDC40Q4G0X9 1142 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 PREPLQ4J6C6 727 aaPredicted RBP13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 C10orf120Q5SQS8 335 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 ISM2Q6H9L7 571 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 CCDC186Q7Z3E2 898 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 CACNA2D4Q7Z3S7 1137 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 BBS7Q8IWZ6 715 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 ELOA2Q8IYF1 753 aaPredicted RBP13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 SLC4A11Q8NBS3 891 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 TATDN2Q93075 761 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 SLC35C1Q96A29 364 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 DHTKD1Q96HY7 919 aaPredicted RBP13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 CEP63Q96MT8 703 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 METTL14Q9HCE5 456 aaKnown RBP13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 ARHGEF4Q9NR80 690 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 NAGPAQ9UK23 515 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 CDV3Q9UKY7 258 aaKnown RBP13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 COQ4Q9Y3A0 265 aa13.02□□□□□ -0.33
CTDNEP1-205ENST00000570828 HELZP42694 1942 aaKnown RBP13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 ANAPC1Q9H1A4 1944 aa13.01□□□□□ -0.33
CTDNEP1-205ENST00000570828 HOXC11O43248 304 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms