RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 HLA-DRAP01903 254 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 CFIP05156 583 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 SLFN14P0C7P3 912 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 ZDHHC11BP0C7U3 371 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 PRR29P0C7W0 189 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 C1QTNF9P0C862 333 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 CD58P19256 250 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 ITPKAP23677 461 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 EIF2DP41214 584 aaKnown RBP9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 PIK3CAP42336 1068 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 TNFRSF4P43489 277 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 ASPAP45381 313 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 AP3M2P53677 418 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 CLDN10P78369 228 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 ZNF252P-AS1Q0IIN9 211 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 SGSM1Q2NKQ1 1148 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 MAP7D1Q3KQU3 841 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 ZACNQ401N2 412 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 C1orf220Q5T0J3 134 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 EGFLAMQ63HQ2 1017 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 TOGARAM2Q6ZUX3 1019 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 C11orf74Q86VG3 221 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 HSCBQ8IWL3 235 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 ETFBKMTQ8IXQ9 262 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 DEFB124Q8NES8 71 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 OVCA2Q8WZ82 227 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 SNX21Q969T3 373 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 BBS2Q9BXC9 721 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 SLC6A17Q9H1V8 727 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 KCTD10Q9H3F6 313 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 VRTNQ9H8Y1 702 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 NMUR1Q9HB89 426 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 DNAJC17Q9NVM6 304 aaKnown RBP9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 DMAC2Q9NW81 257 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 PLK2Q9NYY3 685 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 HCN2Q9UL51 889 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 A0A1W2PQH9 124 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 FAM92AA1XBS5 289 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 HOXC11O43248 304 aaPredicted RBP9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 ASS1P00966 412 aaKnown RBP9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 FAM200BP0CF97 657 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 TRIM49P0CI25 452 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 TRIM49CP0CI26 452 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 PDIA4P13667 645 aaKnown RBP9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 P4HA1P13674 534 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 HOXB2P14652 356 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 PFKFB1P16118 471 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 GABRG2P18507 467 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 ACO1P21399 889 aaKnown RBP9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 GCLMP48507 274 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 TUBP50607 506 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 SHC2P98077 582 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 RPL6Q02878 288 aaKnown RBP9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 ZNF394Q53GI3 561 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 SNX30Q5VWJ9 437 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 LYSMD4Q5XG99 296 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 GRAMD4Q6IC98 578 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 KIAA1211LQ6NV74 962 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 CHPFQ8IZ52 775 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 CRYBG2Q8N1P7 616 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 KIAA1958Q8N8K9 716 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 TERB1Q8NA31 727 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 OR2I1PQ8NGU4 316 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 TAS1R2Q8TE23 839 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 OTUB2Q96DC9 234 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 CYFIP2Q96F07 1278 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 GTPBP2Q9BX10 602 aaKnown RBP9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 KLF16Q9BXK1 252 aaPredicted RBP9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 APOBEC3GQ9HC16 384 aaKnown RBP9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 CD93Q9NPY3 652 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 TLR8Q9NR97 1041 aaKnown RBP9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 CALCOCO1Q9P1Z2 691 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 RCOR1Q9UKL0 485 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 CFAP45Q9UL16 551 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 FRMD4BQ9Y2L6 1034 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 RAD54BQ9Y620 910 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 ADAMTS9Q9P2N4 1935 aa9.09□□□□□ -0.95
CTDNEP1-203ENST00000570385 A0A1W2PQF6 199 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 WASH3PC4AMC7 463 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 PRRT4C9JH25 899 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 HHLA1C9JL84 531 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 PDXKO00764 312 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 GREM1O60565 184 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 RPN1P04843 607 aaKnown RBP9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 RARGP13631 454 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 TYRP14679 529 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 ENGP17813 658 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 NTSR1P30989 418 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 ATP5C1P36542 298 aaKnown RBP9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 VAMP7P51809 220 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 PPP3CAQ08209 521 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 HSF5Q4G112 596 aaPredicted RBP9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 C10orf120Q5SQS8 335 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 CLEC20AQ6ZU45 233 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 HTR3DQ70Z44 454 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 UNC93AQ86WB7 457 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 SYT12Q8IV01 421 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 SLC9A9Q8IVB4 645 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 TMC2Q8TDI7 906 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 EEF2KMTQ96G04 330 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms