RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 CCND1P24385 295 aa5.6□□□□□ -1.51
CHD9-220ENST00000569794 HALP42357 657 aa5.6□□□□□ -1.51
CHD9-220ENST00000569794 MINDY4Q4G0A6 757 aa5.6□□□□□ -1.51
CHD9-220ENST00000569794 KRT78Q8N1N4 520 aa5.6□□□□□ -1.51
CHD9-220ENST00000569794 SIRT6Q8N6T7 355 aa5.6□□□□□ -1.51
CHD9-220ENST00000569794 ZNF548Q8NEK5 533 aaPredicted RBP5.6□□□□□ -1.51
CHD9-220ENST00000569794 STRBPQ96SI9 672 aaKnown RBP5.6□□□□□ -1.51
CHD9-220ENST00000569794 VPS33BQ9H267 617 aa5.6□□□□□ -1.51
CHD9-220ENST00000569794 TNKSO95271 1327 aa5.59□□□□□ -1.51
CHD9-220ENST00000569794 GTPBP1O00178 669 aaKnown RBP5.59□□□□□ -1.51
CHD9-220ENST00000569794 APAF1O14727 1248 aa5.59□□□□□ -1.51
CHD9-220ENST00000569794 CNOT3O75175 753 aaKnown RBP5.59□□□□□ -1.51
CHD9-220ENST00000569794 SNUPNO95149 360 aaKnown RBP5.59□□□□□ -1.51
CHD9-220ENST00000569794 MT-CO3P00414 261 aa5.59□□□□□ -1.51
CHD9-220ENST00000569794 CYP2C9P11712 490 aa5.59□□□□□ -1.51
CHD9-220ENST00000569794 MCCP23508 829 aa5.59□□□□□ -1.51
CHD9-220ENST00000569794 HTR3AP46098 478 aa5.59□□□□□ -1.51
CHD9-220ENST00000569794 ME1P48163 572 aa5.59□□□□□ -1.51
CHD9-220ENST00000569794 DGKEP52429 567 aa5.59□□□□□ -1.51
CHD9-220ENST00000569794 POU5F1Q01860 360 aaKnown RBP5.59□□□□□ -1.51
CHD9-220ENST00000569794 ID2Q02363 134 aa5.59□□□□□ -1.51
CHD9-220ENST00000569794 CHAF1AQ13111 956 aaPredicted RBP5.59□□□□□ -1.51
CHD9-220ENST00000569794 BIRC3Q13489 604 aa5.59□□□□□ -1.51
CHD9-220ENST00000569794 KCTD2Q14681 263 aa5.59□□□□□ -1.51
CHD9-220ENST00000569794 ZIK1Q3SY52 487 aaPredicted RBP5.59□□□□□ -1.51
CHD9-220ENST00000569794 AWAT1Q58HT5 328 aa5.59□□□□□ -1.51
CHD9-220ENST00000569794 C1orf228Q6PIY5 440 aa5.59□□□□□ -1.51
CHD9-220ENST00000569794 SLC35A4Q96G79 324 aa5.59□□□□□ -1.51
CHD9-220ENST00000569794 MESP1Q9BRJ9 268 aa5.59□□□□□ -1.51
CHD9-220ENST00000569794 HERPUD2Q9BSE4 406 aa5.59□□□□□ -1.51
CHD9-220ENST00000569794 PLCB1Q9NQ66 1216 aa5.59□□□□□ -1.51
CHD9-220ENST00000569794 ANP32CO43423 234 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 NBNO60934 754 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 KCNA3P22001 575 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 SERPINB3P29508 390 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 COPB2P35606 906 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 UCP3P55916 312 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 GEMIN4P57678 1058 aaKnown RBP5.58□□□□□ -1.52
CHD9-220ENST00000569794 CFHR1Q03591 330 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 STK3Q13188 491 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 SAFBQ15424 915 aaKnown RBP eCLIP5.58□□□□□ -1.52
CHD9-220ENST00000569794 SEC23BQ15437 767 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 NPY5RQ15761 445 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 ARHGAP29Q52LW3 1261 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 KHDC1LQ5JSQ8 128 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 UBAP2Q5T6F2 1119 aaKnown RBP5.58□□□□□ -1.52
CHD9-220ENST00000569794 PIM3Q86V86 326 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 LIX1LQ8IVB5 337 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 ARFGAP1Q8N6T3 406 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 CELF5Q8N6W0 485 aaKnown RBP5.58□□□□□ -1.52
CHD9-220ENST00000569794 CCDC89Q8N998 374 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 LRGUKQ96M69 825 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 CTAGE1Q96RT6 745 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 SELENOOQ9BVL4 669 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 PCDHA6Q9UN73 950 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 PROCRQ9UNN8 238 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 TMX2Q9Y320 296 aa5.58□□□□□ -1.52
CHD9-220ENST00000569794 MORC2Q9Y6X9 1032 aaPredicted RBP5.58□□□□□ -1.52
CHD9-220ENST00000569794 FRMPD2Q68DX3 1309 aaPredicted RBP5.57□□□□□ -1.52
CHD9-220ENST00000569794 ANO9A1A5B4 782 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 CYSRT1A8MQ03 144 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 B4DGG1 531 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 EPB41L2O43491 1005 aaKnown RBP5.57□□□□□ -1.52
CHD9-220ENST00000569794 POU2F2P09086 479 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 PF4V1P10720 104 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 PHKG2P15735 406 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 CASP2P42575 452 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 WNT3P56703 355 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 KRT17Q04695 432 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 PGS1Q32NB8 556 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 TMTC4Q5T4D3 741 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 FAM43BQ6ZT52 329 aaPredicted RBP5.57□□□□□ -1.52
CHD9-220ENST00000569794 ANKRD13BQ86YJ7 626 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.57□□□□□ -1.52
CHD9-220ENST00000569794 PARD3BQ8TEW8 1205 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 TNIP3Q96KP6 325 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 CAMK1GQ96NX5 476 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 FAM234AQ9H0X4 552 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 ZNF69Q9UC07 566 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 HS3ST3B1Q9Y662 390 aa5.57□□□□□ -1.52
CHD9-220ENST00000569794 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.57□□□□□ -1.52
CHD9-220ENST00000569794 CES2O00748 559 aa5.56□□□□□ -1.52
CHD9-220ENST00000569794 PIP5K1CO60331 668 aa5.56□□□□□ -1.52
CHD9-220ENST00000569794 CTSAP10619 480 aa5.56□□□□□ -1.52
CHD9-220ENST00000569794 GKP32189 559 aa5.56□□□□□ -1.52
CHD9-220ENST00000569794 SLC11A2P49281 568 aa5.56□□□□□ -1.52
CHD9-220ENST00000569794 LMAN2Q12907 356 aa5.56□□□□□ -1.52
CHD9-220ENST00000569794 SIM2Q14190 667 aaPredicted RBP5.56□□□□□ -1.52
CHD9-220ENST00000569794 MYBPC2Q14324 1141 aa5.56□□□□□ -1.52
CHD9-220ENST00000569794 GRM3Q14832 879 aa5.56□□□□□ -1.52
CHD9-220ENST00000569794 LARS2Q15031 903 aaKnown RBP5.56□□□□□ -1.52
CHD9-220ENST00000569794 MGAT5BQ3V5L5 792 aa5.56□□□□□ -1.52
CHD9-220ENST00000569794 ANO7Q6IWH7 933 aa5.56□□□□□ -1.52
CHD9-220ENST00000569794 LVRNQ6Q4G3 990 aa5.56□□□□□ -1.52
CHD9-220ENST00000569794 COLCA1Q6ZS62 124 aa5.56□□□□□ -1.52
CHD9-220ENST00000569794 THOC3Q96J01 351 aaKnown RBP5.56□□□□□ -1.52
CHD9-220ENST00000569794 C17orf80Q9BSJ5 609 aa5.56□□□□□ -1.52
CHD9-220ENST00000569794 SARS2Q9NP81 518 aaKnown RBP5.56□□□□□ -1.52
CHD9-220ENST00000569794 MED16Q9Y2X0 877 aa5.56□□□□□ -1.52
CHD9-220ENST00000569794 PRSS44E7EML9 344 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms