RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 MMRN1Q13201 1228 aa23.51■■□□□ 1.35
VCPKMT-205ENST00000569518 PKN2Q16513 984 aaKnown RBP23.51■■□□□ 1.35
VCPKMT-205ENST00000569518 CA9Q16790 459 aa23.51■■□□□ 1.35
VCPKMT-205ENST00000569518 SYPL2Q5VXT5 272 aa23.51■■□□□ 1.35
VCPKMT-205ENST00000569518 PM20D1Q6GTS8 502 aa23.51■■□□□ 1.35
VCPKMT-205ENST00000569518 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.51■■□□□ 1.35
VCPKMT-205ENST00000569518 C11orf49Q9H6J7 331 aa23.51■■□□□ 1.35
VCPKMT-205ENST00000569518 DRG1Q9Y295 367 aaKnown RBP23.51■■□□□ 1.35
VCPKMT-205ENST00000569518 ZNF487B1APH4 448 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 OR4Q2P0C623 313 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 FGFR3P22607 806 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 RFC2P35250 354 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 SULT1E1P49888 294 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 DPYSL2Q16555 572 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 LRRC26Q2I0M4 334 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 ERMARDQ5T6L9 678 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 RFX6Q8HWS3 928 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 SPATA2LQ8IUW3 424 aaPredicted RBP23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 MAP7D3Q8IWC1 876 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 LRRC43Q8N309 656 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 TTC13Q8NBP0 860 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 IRGQQ8WZA9 623 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 HAUS1Q96CS2 278 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 FAM129AQ9BZQ8 928 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 STAP1Q9ULZ2 295 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 FAN1Q9Y2M0 1017 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 USP3Q9Y6I4 520 aa23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 SF3B1O75533 1304 aaKnown RBP eCLIP23.5■■□□□ 1.35
VCPKMT-205ENST00000569518 APOC4-APOC2K7ER74 178 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 TP73O15350 636 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 APOC2P02655 101 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 GALTP07902 379 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 DYNLT1P63172 113 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 LMNB2Q03252 620 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 KRT81Q14533 505 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 SLC39A12Q504Y0 691 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 FAM171A1Q5VUB5 890 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 DCP1BQ8IZD4 617 aaKnown RBP23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 CCDC185Q8N715 623 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 ACTL9Q8TC94 416 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 FBXO25Q8TCJ0 367 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 FAF2Q96CS3 445 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 PAWRQ96IZ0 340 aaKnown RBP23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 FMO2Q99518 471 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 WHRNQ9P202 907 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 LTFP02788 710 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 ITGAVP06756 1048 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 KLRC2P26717 231 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 OTUD4Q01804 1114 aaKnown RBP23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 IKBKEQ14164 716 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 ALLCQ8N6M5 410 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 ART4Q93070 314 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 RNF157Q96PX1 679 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 ZNF670Q9BS34 389 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 ACBD3Q9H3P7 528 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 MTMR10Q9NXD2 777 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 SAE1Q9UBE0 346 aaPredicted RBP23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 NAALADL1Q9UQQ1 740 aa23.49■■□□□ 1.35
VCPKMT-205ENST00000569518 CYP2F1P24903 491 aa23.48■■□□□ 1.35
VCPKMT-205ENST00000569518 L1CAMP32004 1257 aa23.48■■□□□ 1.35
VCPKMT-205ENST00000569518 PLTPP55058 493 aa23.48■■□□□ 1.35
VCPKMT-205ENST00000569518 FUT10Q6P4F1 479 aa23.48■■□□□ 1.35
VCPKMT-205ENST00000569518 TMC3Q7Z5M5 1100 aa23.48■■□□□ 1.35
VCPKMT-205ENST00000569518 TMEM173Q86WV6 379 aaPredicted RBP23.48■■□□□ 1.35
VCPKMT-205ENST00000569518 FUBP3Q96I24 572 aaKnown RBP eCLIP23.48■■□□□ 1.35
VCPKMT-205ENST00000569518 TXLNGYQ9BZA5 131 aa23.48■■□□□ 1.35
VCPKMT-205ENST00000569518 ASIC3Q9UHC3 531 aa23.48■■□□□ 1.35
VCPKMT-205ENST00000569518 AP4E1Q9UPM8 1137 aa23.48■■□□□ 1.35
VCPKMT-205ENST00000569518 KIAA0100Q14667 2235 aaKnown RBP23.48■■□□□ 1.35
VCPKMT-205ENST00000569518 TNFRSF10BO14763 440 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 PECAM1P16284 738 aaPredicted RBP23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 RDXP35241 583 aaKnown RBP23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 TFDP2Q14188 446 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 NFE2Q16621 373 aaPredicted RBP23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 PQLC3Q8N755 202 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 BCL7CQ8WUZ0 217 aaPredicted RBP23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 OR6C75A6NL08 312 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 H3BQF6 201 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 AGPSO00116 658 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 DGKIO75912 1065 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 PBX3P40426 434 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 ELAVL2Q12926 359 aaKnown RBP23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 CTXN3Q4LDR2 81 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 ANKRD20A8PQ5CZ79 823 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 ZNF280DQ6N043 979 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 FAM131BQ86XD5 332 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 PSTKQ8IV42 348 aaKnown RBP23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 PCDH19Q8TAB3 1148 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 LRRC45Q96CN5 670 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 SNF8Q96H20 258 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 B3GALT6Q96L58 329 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 FZD10Q9ULW2 581 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 ZNF148Q9UQR1 794 aa23.47■■□□□ 1.35
VCPKMT-205ENST00000569518 M0QYT0 321 aa23.46■■□□□ 1.35
VCPKMT-205ENST00000569518 EFEMP2O95967 443 aa23.46■■□□□ 1.35
VCPKMT-205ENST00000569518 TRIP13Q15645 432 aaPredicted RBP23.46■■□□□ 1.35
VCPKMT-205ENST00000569518 ALS2CLQ60I27 953 aa23.46■■□□□ 1.35
VCPKMT-205ENST00000569518 SLC9A4Q6AI14 798 aa23.46■■□□□ 1.35
VCPKMT-205ENST00000569518 ZNF365Q70YC5 407 aa23.46■■□□□ 1.35
VCPKMT-205ENST00000569518 IQCKQ8N0W5 287 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms