RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 PPM1EQ8WY54 764 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 PIK3R5Q8WYR1 880 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 TSC1Q92574 1164 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 KHSRPQ92945 711 aaKnown RBP eCLIP7.98□□□□□ -1.13
CDH13-214ENST00000569455 RNF25Q96BH1 459 aaPredicted RBP7.98□□□□□ -1.13
CDH13-214ENST00000569455 C8orf48Q96LL4 319 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 CFAP57Q96MR6 1250 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 SLITRK1Q96PX8 696 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 TGS1Q96RS0 853 aaKnown RBP7.98□□□□□ -1.13
CDH13-214ENST00000569455 KRT12Q99456 494 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 GAS2L1Q99501 681 aaPredicted RBP7.98□□□□□ -1.13
CDH13-214ENST00000569455 AP1M1Q9BXS5 423 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 OSBPL8Q9BZF1 889 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 FBXO44Q9H4M3 255 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 ZWILCHQ9H900 591 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 POPDC2Q9HBU9 364 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 TMEM51Q9NW97 253 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 SPG21Q9NZD8 308 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 LMCD1Q9NZU5 365 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 HCSTQ9UBK5 93 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 MTRRQ9UBK8 725 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 PCSK1NQ9UHG2 260 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 EFR3BQ9Y2G0 817 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 PCDHB12Q9Y5F1 795 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 BACE2Q9Y5Z0 518 aa7.98□□□□□ -1.13
CDH13-214ENST00000569455 LINC01553A4QN01 128 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 GRXCR1A8MXD5 290 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 TBC1D4O60343 1298 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 RTN3O95197 1032 aaPredicted RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 EFEMP2O95967 443 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 F9P00740 461 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 LTFP02788 710 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 URODP06132 367 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 CA3P07451 260 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 USP17L7P0C7H9 530 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 RARAP10276 462 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 RALAP11233 206 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 POU3F3P20264 500 aaPredicted RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 KDELR1P24390 212 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 CYP2F1P24903 491 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 PBX3P40426 434 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 GLUD2P49448 558 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 NDUFV1P49821 464 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 CACNA2D1P54289 1103 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 ARPP19P56211 112 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 RPL10AP62906 217 aaKnown RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 CREMQ03060 361 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 KRT17Q04695 432 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 UBE3AQ05086 875 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 DHX34Q14147 1143 aaKnown RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 KRT81Q14533 505 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 PDK2Q15119 407 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 C15orf59Q2T9L4 293 aaPredicted RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 DCAF6Q58WW2 860 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 TFDP3Q5H9I0 405 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 PM20D1Q6GTS8 502 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 TRNP1Q6NT89 227 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 AADACL2Q6P093 401 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 WDR93Q6P2C0 686 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 SCYL2Q6P3W7 929 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 SPOCD1Q6ZMY3 1216 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 SND1Q7KZF4 910 aaKnown RBP eCLIP7.97□□□□□ -1.13
CDH13-214ENST00000569455 BEND5Q7L4P6 421 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 GPRIN1Q7Z2K8 1008 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 ADAT2Q7Z6V5 191 aaKnown RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 DDX53Q86TM3 631 aaKnown RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 TMEM173Q86WV6 379 aaPredicted RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 VSIG1Q86XK7 387 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 IFT20Q8IY31 132 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 RNF168Q8IYW5 571 aaPredicted RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 NUP93Q8N1F7 819 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 ARHGAP18Q8N392 663 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 ARFGAP1Q8N6T3 406 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 C12orf50Q8NA57 414 aaPredicted RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 COLGALT1Q8NBJ5 622 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 KCTD6Q8NC69 237 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 FBXO22Q8NEZ5 403 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 CMASQ8NFW8 434 aaPredicted RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 BCL7CQ8WUZ0 217 aaPredicted RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 RIN2Q8WYP3 895 aaPredicted RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 ANKRD7Q92527 254 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 CENPIQ92674 756 aaPredicted RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 MAGOHBQ96A72 148 aaKnown RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 B3GALT6Q96L58 329 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 CEP295NLQ96MC4 621 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 NECAB3Q96P71 396 aaPredicted RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 SLC2A13Q96QE2 648 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 LRRC1Q9BTT6 524 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 C11orf84Q9BUA3 381 aaPredicted RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 HERC2P3Q9BVR0 1158 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 PARD6BQ9BYG5 372 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 RHOBTB2Q9BYZ6 727 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 DDX47Q9H0S4 455 aaKnown RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 ANKZF1Q9H8Y5 726 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 COMMD8Q9NX08 183 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 STIM2Q9P246 746 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 FEZ2Q9UHY8 353 aaPredicted RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 RASAL2Q9UJF2 1139 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 RAB21Q9UL25 225 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 SSX2IPQ9Y2D8 614 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms