RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 LMO2P25791 158 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 MAGEA8P43361 318 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 RNASELQ05823 741 aaKnown RBP9.11□□□□□ -0.95
LINC00558-201ENST00000569422 FAAP100Q0VG06 881 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 XRCC4Q13426 336 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 CCL15Q16663 113 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 RELL1Q8IUW5 271 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 VPS37AQ8NEZ2 397 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 KCNN1Q92952 543 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 SNRNP25Q9BV90 132 aaKnown RBP9.11□□□□□ -0.95
LINC00558-201ENST00000569422 MAGED2Q9UNF1 606 aaPredicted RBP9.11□□□□□ -0.95
LINC00558-201ENST00000569422 DNAJC8O75937 253 aaPredicted RBP9.11□□□□□ -0.95
LINC00558-201ENST00000569422 SNAI1O95863 264 aaPredicted RBP9.11□□□□□ -0.95
LINC00558-201ENST00000569422 OAS1P00973 400 aaKnown RBP9.11□□□□□ -0.95
LINC00558-201ENST00000569422 INHBAP08476 426 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 KRT16P08779 473 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 ATICP31939 592 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 IRX4P78413 519 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 ZNF200P98182 395 aaPredicted RBP9.11□□□□□ -0.95
LINC00558-201ENST00000569422 PTK7Q13308 1070 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 MARCH8Q5T0T0 291 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 PRPF39Q86UA1 669 aaKnown RBP9.11□□□□□ -0.95
LINC00558-201ENST00000569422 SUGP1Q8IWZ8 645 aaKnown RBP9.11□□□□□ -0.95
LINC00558-201ENST00000569422 FNIP1Q8TF40 1166 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 RNF157Q96PX1 679 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 FAM111AQ96PZ2 611 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 SLC13A1Q9BZW2 595 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 MYLK2Q9H1R3 596 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 CYP3A43Q9HB55 503 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 NOD2Q9HC29 1040 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 TMPRSS4Q9NRS4 437 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 HAO1Q9UJM8 370 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 MFHAS1Q9Y4C4 1052 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 NME7Q9Y5B8 376 aa9.11□□□□□ -0.95
LINC00558-201ENST00000569422 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.1□□□□□ -0.95
LINC00558-201ENST00000569422 A0A0G2JND7 137 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 A0A1B0GUA9 196 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 BTBD19C9JJ37 291 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 APOL1O14791 398 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 CHUKO15111 745 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 PAPSS1O43252 624 aaPredicted RBP9.1□□□□□ -0.95
LINC00558-201ENST00000569422 ATP2A2P16615 1042 aaKnown RBP9.1□□□□□ -0.95
LINC00558-201ENST00000569422 CCNA1P78396 465 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 GBE1Q04446 702 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 BMPR2Q13873 1038 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 LCLAT1Q6UWP7 414 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 MAMDC4Q6UXC1 1216 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 MAP7D3Q8IWC1 876 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 PYROXD2Q8N2H3 581 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 RIBC1Q8N443 379 aaPredicted RBP9.1□□□□□ -0.95
LINC00558-201ENST00000569422 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.1□□□□□ -0.95
LINC00558-201ENST00000569422 PLD5Q8N7P1 536 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 PPTC7Q8NI37 304 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 PCDH19Q8TAB3 1148 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 SPACA7Q96KW9 195 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 TACO1Q9BSH4 297 aaKnown RBP9.1□□□□□ -0.95
LINC00558-201ENST00000569422 RNF39Q9H2S5 420 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 ITGA11Q9UKX5 1188 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 PIN4Q9Y237 131 aaKnown RBP9.1□□□□□ -0.95
LINC00558-201ENST00000569422 TCRBV9S1A1TA0A576 114 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 C2orf71A6NGG8 1288 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 ADCY6O43306 1168 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 ATP6V1G2O95670 118 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 PYGBP11216 843 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 NQO1P15559 274 aaKnown RBP9.1□□□□□ -0.95
LINC00558-201ENST00000569422 YBX3P16989 372 aaKnown RBP eCLIP9.1□□□□□ -0.95
LINC00558-201ENST00000569422 ACAT1P24752 427 aaKnown RBP9.1□□□□□ -0.95
LINC00558-201ENST00000569422 PTPN7P35236 360 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 GRIA1P42261 906 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 CASC4Q6P4E1 433 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 LRRC6Q86X45 466 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 FAM131BQ86XD5 332 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 DNAJB3Q8WWF6 145 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 ZNF75CPQ92670 426 aaPredicted RBP9.1□□□□□ -0.95
LINC00558-201ENST00000569422 RXFP1Q9HBX9 757 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 UTP6Q9NYH9 597 aaKnown RBP9.1□□□□□ -0.95
LINC00558-201ENST00000569422 SEPT10Q9P0V9 454 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 hCG_2014768A0A024R1R8 64 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 UGT1A9O60656 530 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 LPXNO60711 386 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 RECQL4O94761 1208 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 CBX6O95503 412 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 CRADDP78560 199 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 NR1H3Q13133 447 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 TFDP2Q14188 446 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 NOMO1Q15155 1222 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 ZNF792Q3KQV3 632 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 EFHC2Q5JST6 749 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 CYP4V2Q6ZWL3 525 aaPredicted RBP9.1□□□□□ -0.95
LINC00558-201ENST00000569422 OTOAQ7RTW8 1153 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 DENND1AQ8TEH3 1009 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 SERAC1Q96JX3 654 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 LRRC37BQ96QE4 947 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 UGT1A7Q9HAW7 530 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 UGT1A10Q9HAW8 530 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 UGT1A8Q9HAW9 530 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 PCDH18Q9HCL0 1135 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 GJD2Q9UKL4 321 aa9.1□□□□□ -0.95
LINC00558-201ENST00000569422 SMG5Q9UPR3 1016 aaKnown RBP9.1□□□□□ -0.95
LINC00558-201ENST00000569422 PCDHGA4Q9Y5G9 962 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms