RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 BBS2Q9BXC9 721 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 ELOVL4Q9GZR5 314 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 ST6GALNAC4Q9H4F1 302 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 ZHX3Q9H4I2 956 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 COMMD8Q9NX08 183 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 EIF2B4Q9UI10 523 aaKnown RBP9.21□□□□□ -0.94
SMG1-216ENST00000569122 LSM7Q9UK45 103 aaKnown RBP9.21□□□□□ -0.94
SMG1-216ENST00000569122 ANKRD6Q9Y2G4 727 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 SPTA1P02549 2419 aa9.21□□□□□ -0.94
SMG1-216ENST00000569122 PP2D1A8MPX8 630 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 NEDD8-MDP1E9PL57 170 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 F8VP50 259 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 SCAMP3O14828 347 aaKnown RBP9.2□□□□□ -0.94
SMG1-216ENST00000569122 YKT6O15498 198 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 COCHO43405 550 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 TLX3O43711 291 aaPredicted RBP9.2□□□□□ -0.94
SMG1-216ENST00000569122 RFPL3O75679 317 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 TMEM191BP0C7N4 346 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 C6P13671 934 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 TYRP14679 529 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 PLCG1P19174 1290 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 CSNK1EP49674 416 aaKnown RBP9.2□□□□□ -0.94
SMG1-216ENST00000569122 TPMTP51580 245 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 CXADRP78310 365 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 HMGN5P82970 282 aaKnown RBP9.2□□□□□ -0.94
SMG1-216ENST00000569122 FUT11Q495W5 492 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 PKDCCQ504Y2 493 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 ARSHQ5FYA8 562 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 HTR3DQ70Z44 454 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 HS2ST1Q7LGA3 356 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 ADAT2Q7Z6V5 191 aaKnown RBP9.2□□□□□ -0.94
SMG1-216ENST00000569122 OSTM1Q86WC4 334 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 GPBP1Q86WP2 473 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 TMPRSS6Q8IU80 811 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 BBS7Q8IWZ6 715 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 FAM184AQ8NB25 1140 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 C1orf216Q8TAB5 229 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 CALML4Q96GE6 196 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 PCED1BQ96HM7 432 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 ANKRD36BP1Q96IX9 119 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 AK8Q96MA6 479 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 ACOX2Q99424 681 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 REEP2Q9BRK0 252 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 LLPHQ9BRT6 129 aaKnown RBP9.2□□□□□ -0.94
SMG1-216ENST00000569122 SNX25Q9H3E2 840 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 IGSF5Q9NSI5 407 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 MARK1Q9P0L2 795 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 HCN2Q9UL51 889 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 BTBD3Q9Y2F9 522 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 SNX11Q9Y5W9 270 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 RAD54BQ9Y620 910 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 STON1Q9Y6Q2 735 aa9.2□□□□□ -0.94
SMG1-216ENST00000569122 NPHP3-ACAD11A0A0J9YXS1 232 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 PRRT4C9JH25 899 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 ANKRD63C9JTQ0 380 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 ENC1O14682 589 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 TIMM44O43615 452 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 ATP2C2O75185 946 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 LDOC1O95751 146 aaPredicted RBP9.19□□□□□ -0.94
SMG1-216ENST00000569122 PDGFRBP09619 1106 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 WARSP23381 471 aaKnown RBP9.19□□□□□ -0.94
SMG1-216ENST00000569122 GNL1P36915 607 aaPredicted RBP9.19□□□□□ -0.94
SMG1-216ENST00000569122 CSRP3P50461 194 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 C21orf59P57076 290 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 TMPRSS3P57727 454 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 PSMC1P62191 440 aaKnown RBP9.19□□□□□ -0.94
SMG1-216ENST00000569122 IRX6P78412 446 aaPredicted RBP9.19□□□□□ -0.94
SMG1-216ENST00000569122 BNC1Q01954 994 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 TLE3Q04726 772 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 TARDBPQ13148 414 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMG1-216ENST00000569122 SURF1Q15526 300 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 ARL6IP4Q66PJ3 421 aaKnown RBP9.19□□□□□ -0.94
SMG1-216ENST00000569122 CRELD2Q6UXH1 353 aaPredicted RBP9.19□□□□□ -0.94
SMG1-216ENST00000569122 LIMS2Q7Z4I7 341 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 LURAP1LQ8IV03 231 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 BRSK2Q8IWQ3 736 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 FAM181AQ8N9Y4 354 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 ZNF248Q8NDW4 579 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 SNX19Q92543 992 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 HPDLQ96IR7 371 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 MMS19Q96T76 1030 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 LGMNQ99538 433 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 ARID3AQ99856 593 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 FAM213AQ9BRX8 229 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 RBAKQ9NYW8 714 aaPredicted RBP9.19□□□□□ -0.94
SMG1-216ENST00000569122 GMIPQ9P107 970 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 ATP8B3O60423 1300 aa9.19□□□□□ -0.94
SMG1-216ENST00000569122 CYSRT1A8MQ03 144 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 KIAA0391O15091 583 aaKnown RBP9.18□□□□□ -0.94
SMG1-216ENST00000569122 TNNC2P02585 160 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 GARTP22102 1010 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 LMO2P25791 158 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 CD27P26842 260 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 UBA7P41226 1012 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 BCAT1P54687 386 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 CDH8P55286 799 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 ZBTB16Q05516 673 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 KCNH2Q12809 1159 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 SFSWAPQ12872 951 aaKnown RBP9.18□□□□□ -0.94
SMG1-216ENST00000569122 IFRD2Q12894 506 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms