RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	TPSAB1	Q15661	275 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883		Q3C1V9	767 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	ATG16L1	Q676U5	607 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	BZW1	Q7L1Q6	419 aa	Known RBP	13.16	□□□□□ -0.3
PKM-222	ENST00000568883	ARC	Q7LC44	396 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	CLNK	Q7Z7G1	428 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	CTAGE3P	Q8IX95	158 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	BEST2	Q8NFU1	509 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	CFAP36	Q96G28	342 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	FERMT1	Q9BQL6	677 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	SYT17	Q9BSW7	474 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	CXorf56	Q9H5V9	222 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	XAB2	Q9HCS7	855 aa	Known RBP	13.16	□□□□□ -0.3
PKM-222	ENST00000568883	BATF3	Q9NR55	127 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	PDGFC	Q9NRA1	345 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	SLC17A7	Q9P2U7	560 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	HEY1	Q9Y5J3	304 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	CCDC22	O60826	627 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	VTN	P04004	478 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	CYP3A5	P20815	502 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	CNTF	P26441	200 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	ETV4	P43268	484 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	CCNG1	P51959	295 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	ZBTB16	Q05516	673 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.16	□□□□□ -0.3	2e-8	■■■□□ 19.2
PKM-222	ENST00000568883	PKDCC	Q504Y2	493 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	ANKRD20A3	Q5VUR7	823 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	ARHGAP17	Q68EM7	881 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	TLDC1	Q6P9B6	456 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	ZNF449	Q6P9G9	518 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	IGDCC3	Q8IVU1	814 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	ZNF276	Q8N554	614 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	PQLC3	Q8N755	202 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	RAB3IL1	Q8TBN0	382 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	NSMCE1	Q8WV22	266 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	SNRNP25	Q9BV90	132 aa	Known RBP	13.16	□□□□□ -0.3
PKM-222	ENST00000568883	ADAM33	Q9BZ11	813 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	PTPRF	P10586	1907 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	RBM47	A0AV96	593 aa	Known RBP	13.15	□□□□□ -0.3
PKM-222	ENST00000568883	GCAT	O75600	419 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	LUC7L3	O95232	432 aa	Known RBP	13.15	□□□□□ -0.3
PKM-222	ENST00000568883	ATP5B	P06576	529 aa	Known RBP	13.15	□□□□□ -0.3
PKM-222	ENST00000568883	PFKM	P08237	780 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	PYGB	P11216	843 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	RBL1	P28749	1068 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	ACADSB	P45954	432 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	SERPINB4	P48594	390 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	RGS7	P49802	495 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	CDK16	Q00536	496 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	PRKD1	Q15139	912 aa	Predicted RBP	13.15	□□□□□ -0.3
PKM-222	ENST00000568883	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.15	□□□□□ -0.3
PKM-222	ENST00000568883	SH3PXD2A	Q5TCZ1	1133 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	TRNP1	Q6NT89	227 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	MTDH	Q86UE4	582 aa	Known RBP	13.15	□□□□□ -0.3
PKM-222	ENST00000568883	LONP2	Q86WA8	852 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	PPM1N	Q8N819	430 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	GPATCH11	Q8N954	259 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	SLC35F5	Q8WV83	523 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	TTC17	Q96AE7	1141 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	ZBTB10	Q96DT7	871 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	SERAC1	Q96JX3	654 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	FAM111A	Q96PZ2	611 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	KLF6	Q99612	283 aa	Predicted RBP	13.15	□□□□□ -0.3
PKM-222	ENST00000568883	TBC1D10A	Q9BXI6	508 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	NRDE2	Q9H7Z3	1164 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	TLE6	Q9H808	572 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	RNPEPL1	Q9HAU8	725 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	POPDC2	Q9HBU9	364 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	L3MBTL1	Q9Y468	752 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	TTLL3	Q9Y4R7	772 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883	PAPPA2	Q9BXP8	1791 aa		13.15	□□□□□ -0.3
PKM-222	ENST00000568883		A0A0G2JND7	137 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	TRIM49D1	C9J1S8	452 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	GRAP2	O75791	330 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	APOE	P02649	317 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	APRT	P07741	180 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	IL4R	P24394	825 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	CYP2F1	P24903	491 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	CLNS1A	P54105	237 aa	Known RBP	13.14	□□□□□ -0.31
PKM-222	ENST00000568883	CDK18	Q07002	472 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	DPYSL2	Q16555	572 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	DBN1	Q16643	649 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	PMF1	Q6P1K2	205 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.14	□□□□□ -0.31
PKM-222	ENST00000568883	HACE1	Q8IYU2	909 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	ARHGAP24	Q8N264	748 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	PCDH19	Q8TAB3	1148 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	GSDMB	Q8TAX9	411 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	13.14	□□□□□ -0.31
PKM-222	ENST00000568883	CLMN	Q96JQ2	1002 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	SRPK1	Q96SB4	655 aa	Known RBP	13.14	□□□□□ -0.31
PKM-222	ENST00000568883	TSPAN18	Q96SJ8	248 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	PPP1R16B	Q96T49	567 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	DCTN4	Q9UJW0	460 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	SNX9	Q9Y5X1	595 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883		A8MUI8	341 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	HACD1	B0YJ81	288 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883		H3BRB1	525 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	PIK3R2	O00459	728 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	XPOT	O43592	962 aa	Known RBP	13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms