RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 RPP40O75818 363 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 ALDH1A2O94788 518 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 RHOBTB1O94844 696 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 CST3P01034 146 aaPredicted RBP4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 RPN1P04843 607 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 MYL1P05976 194 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 SLFN14P0C7P3 912 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 MBL2P11226 248 aaPredicted RBP4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 KRT13P13646 458 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 ARSAP15289 507 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 RPL13P26373 211 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 YWHAQP27348 245 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 GJA4P35212 333 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 PI4KAP42356 2102 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 ATXN1P54253 815 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 WNT7BP56706 349 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 NOP14P78316 857 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 GOLGA8FQ08AF8 430 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 GOLGA8DPQ0D2H9 430 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 IFRD2Q12894 506 aaPredicted RBP4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 HLTFQ14527 1009 aaKnown RBP eCLIP4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 ELF2Q15723 593 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 CSRP2Q16527 193 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 SGSM1Q2NKQ1 1148 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 ZNF699Q32M78 642 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 AASDHQ4L235 1098 aaPredicted RBP4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 USP39Q53GS9 565 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 COX20Q5RI15 118 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 RESP18Q5W5W9 173 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 BTBD8Q5XKL5 378 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 IL31Q6EBC2 164 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 TXNDC11Q6PKC3 985 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 Q6ZS52 159 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 EPM2AIP1Q7L775 607 aaPredicted RBP4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 TMEM150AQ86TG1 271 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 OSTM1Q86WC4 334 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 C12orf56Q8IXR9 622 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 ABCA7Q8IZY2 2146 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 NUP93Q8N1F7 819 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 FAM160A2Q8N612 972 aaPredicted RBP4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 KIAA1958Q8N8K9 716 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 PDZD8Q8NEN9 1154 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 RPLP0P6Q8NHW5 317 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 CXorf38Q8TB03 319 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 NETO1Q8TDF5 533 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 SCFD1Q8WVM8 642 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 GAB3Q8WWW8 586 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 MYLPFQ96A32 169 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 THAP11Q96EK4 314 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 PCED1BQ96HM7 432 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 LOXL4Q96JB6 756 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 MRPL45Q9BRJ2 306 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 FGFBP2Q9BYJ0 223 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 IMPG2Q9BZV3 1241 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 FBXO44Q9H4M3 255 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 HPS4Q9NQG7 708 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 SEMA4GQ9NTN9 838 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 COMMD8Q9NX08 183 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 DLL3Q9NYJ7 618 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 RCOR1Q9UKL0 485 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 ARHGAP26Q9UNA1 814 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 COMMD10Q9Y6G5 202 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 CEP192Q8TEP8 1941 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 NCANO14594 1321 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 MYO15AQ9UKN7 3530 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 MYO16Q9Y6X6 1858 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 GVINP1Q7Z2Y8 2422 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 DCDC2BA2VCK2 349 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 ZNF840PA6NDX5 716 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 GOLGA6L4A6NEF3 574 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 K7ESF4 209 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 LEFTY2O00292 366 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 PDXKO00764 312 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 IKBKBO14920 756 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 ACTN4O43707 911 aaKnown RBP4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 AKAP3O75969 853 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 APBB3O95704 486 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 STAU1O95793 577 aaKnown RBP4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 ADH1CP00326 375 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 EGFP01133 1207 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 APODP05090 189 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 TDGF1P13385 188 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 CMA1P23946 247 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 GBP1P32455 592 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 HOXD13P35453 343 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 ETFBP38117 255 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 SYKP43405 635 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 PXNP49023 591 aaPredicted RBP4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 DGKEP52429 567 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 MYL6P60660 151 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 KRT85P78386 507 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 SLC7A9P82251 487 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 DNM1Q05193 864 aaKnown RBP4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 DMWDQ09019 674 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 TAF10Q12962 218 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 SQSTM1Q13501 440 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 CUL4BQ13620 913 aa4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 BYSLQ13895 437 aaKnown RBP4.94□□□□□ -1.62
HERPUD1-213ENST00000568358 COL9A2Q14055 689 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms