RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 CACNA2D4Q7Z3S7 1137 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 DDX53Q86TM3 631 aaKnown RBP8.24□□□□□ -1.09
SMG1-214ENST00000568038 PPFIBP1Q86W92 1011 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 METTL23Q86XA0 190 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 ADGRF2Q8IZF7 708 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 VPS52Q8N1B4 723 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 TOP6BLQ8N6T0 577 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 OR6B3Q8NGW1 331 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 ANP32BQ92688 251 aaKnown RBP8.24□□□□□ -1.09
SMG1-214ENST00000568038 TIFAQ96CG3 184 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 SPAG5Q96R06 1193 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 MRPL45Q9BRJ2 306 aaKnown RBP8.24□□□□□ -1.09
SMG1-214ENST00000568038 VN1R3Q9BXE9 311 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 SNX25Q9H3E2 840 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 SLC28A3Q9HAS3 691 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 CYP3A43Q9HB55 503 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 ALG13Q9NP73 1137 aaKnown RBP8.24□□□□□ -1.09
SMG1-214ENST00000568038 KRT82Q9NSB4 513 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 CEP72Q9P209 647 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 PUF60Q9UHX1 559 aaKnown RBP8.24□□□□□ -1.09
SMG1-214ENST00000568038 PCDHB4Q9Y5E5 795 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 ITIH6Q6UXX5 1313 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 PDE4DIPQ5VU43 2346 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 ARHGEF37A1IGU5 675 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 A8MXQ7 604 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 FOXN3O00409 490 aaPredicted RBP8.23□□□□□ -1.09
SMG1-214ENST00000568038 SYN3O14994 580 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 GYPCP04921 128 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 RB1P06400 928 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 KRT5P13647 590 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 TYMPP19971 482 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 WARSP23381 471 aaKnown RBP8.23□□□□□ -1.09
SMG1-214ENST00000568038 ACAT1P24752 427 aaKnown RBP8.23□□□□□ -1.09
SMG1-214ENST00000568038 LMO2P25791 158 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 CASP14P31944 242 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 CA8P35219 290 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 GNL1P36915 607 aaPredicted RBP8.23□□□□□ -1.09
SMG1-214ENST00000568038 CDR1P51861 262 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 NDST1P52848 882 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 YWHAEP62258 255 aaKnown RBP8.23□□□□□ -1.09
SMG1-214ENST00000568038 YWHAHQ04917 246 aaPredicted RBP8.23□□□□□ -1.09
SMG1-214ENST00000568038 USP41Q3LFD5 358 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 OVOS1Q6IE37 1185 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 TMEM270Q6UE05 265 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 PRSS55Q6UWB4 352 aaPredicted RBP8.23□□□□□ -1.09
SMG1-214ENST00000568038 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.23□□□□□ -1.09
SMG1-214ENST00000568038 ENOSF1Q7L5Y1 443 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 DPH6Q7L8W6 267 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 LIMS2Q7Z4I7 341 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 PDZD3Q86UT5 571 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 OSTM1Q86WC4 334 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 TMEM86AQ8N2M4 240 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 KBTBD7Q8WVZ9 684 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 AUTS2Q8WXX7 1259 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 ARNTL2Q8WYA1 636 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 RIN2Q8WYP3 895 aaPredicted RBP8.23□□□□□ -1.09
SMG1-214ENST00000568038 FAXDC2Q96IV6 333 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 FAM81BQ96LP2 452 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 SAMD11Q96NU1 681 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 TTPALQ9BTX7 342 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 C11orf84Q9BUA3 381 aaPredicted RBP8.23□□□□□ -1.09
SMG1-214ENST00000568038 HERC2P3Q9BVR0 1158 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 NAA15Q9BXJ9 866 aaKnown RBP8.23□□□□□ -1.09
SMG1-214ENST00000568038 STK33Q9BYT3 514 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 CISHQ9NSE2 258 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 DDX43Q9NXZ2 648 aaKnown RBP8.23□□□□□ -1.09
SMG1-214ENST00000568038 HMGXB4Q9UGU5 601 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 DSEQ9UL01 958 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 LUC7L2Q9Y383 392 aaKnown RBP8.23□□□□□ -1.09
SMG1-214ENST00000568038 KIAA1671Q9BY89 1806 aa8.23□□□□□ -1.09
SMG1-214ENST00000568038 A0A1W2PPC1 479 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 LRRC53A6NM62 1247 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 C5orf67F2Z3F1 127 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 F8VZ95 297 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 RFXAPO00287 272 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 GABRDO14764 452 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 GRM6O15303 877 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 CILPO75339 1184 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 TACC1O75410 805 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 FBXO24O75426 580 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 GFPT2O94808 682 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 EFEMP2O95967 443 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 CALCAP01258 141 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 SOD2P04179 222 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 URODP06132 367 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 TPM1P09493 284 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 FAM163BP0C2L3 166 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 ACO1P21399 889 aaKnown RBP8.22□□□□□ -1.09
SMG1-214ENST00000568038 NME2P22392 152 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 KRT9P35527 623 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 SOX5P35711 763 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 STAT1P42224 750 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 LHX1P48742 406 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 GLUD2P49448 558 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 FXR1P51114 621 aaKnown RBP eCLIP8.22□□□□□ -1.09
SMG1-214ENST00000568038 ADKP55263 362 aaKnown RBP8.22□□□□□ -1.09
SMG1-214ENST00000568038 ARPP19P56211 112 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 JAM2P57087 298 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 ZBED6P86452 979 aa8.22□□□□□ -1.09
SMG1-214ENST00000568038 ARID5AQ03989 594 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms