RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 TSSK4Q6SA08 328 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 ZNF852Q6ZMS4 543 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 CLEC20AQ6ZU45 233 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 ARID3BQ8IVW6 561 aaPredicted RBP11.64□□□□□ -0.55
LINC01228-201ENST00000567966 MFSD6LQ8IWD5 586 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 SCML4Q8N228 414 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 PDZD8Q8NEN9 1154 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 DNASE1L2Q92874 299 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 SLITRK1Q96PX8 696 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 KCNF1Q9H3M0 494 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 TRPV4Q9HBA0 871 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 IL21Q9HBE4 155 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 CAPN11Q9UMQ6 739 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 BZW2Q9Y6E2 419 aaKnown RBP11.64□□□□□ -0.55
LINC01228-201ENST00000567966 USP3Q9Y6I4 520 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 NUP210Q8TEM1 1887 aaPredicted RBP11.63□□□□□ -0.55
LINC01228-201ENST00000567966 KIF26AQ9ULI4 1882 aaPredicted RBP11.63□□□□□ -0.55
LINC01228-201ENST00000567966 HHLA1C9JL84 531 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 ARNTLO00327 626 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 ZNF263O14978 683 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 EPHB6O15197 1021 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 THAP12O43422 761 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 LAMTOR5O43504 91 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 LMNAP02545 664 aaKnown RBP11.63□□□□□ -0.55
LINC01228-201ENST00000567966 F11P03951 625 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 GPD2P43304 727 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 ACADSBP45954 432 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 RPL34P49207 117 aaKnown RBP11.63□□□□□ -0.55
LINC01228-201ENST00000567966 GPR15P49685 360 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 PDE6CP51160 858 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 KIF11P52732 1056 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 CACNA2D1P54289 1103 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 ZBED6P86452 979 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 CSTF1Q05048 431 aaKnown RBP11.63□□□□□ -0.55
LINC01228-201ENST00000567966 ARHGAP15Q53QZ3 475 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 RAB41Q5JT25 222 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 GPR158Q5T848 1215 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 SNX30Q5VWJ9 437 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 TMC6Q7Z403 805 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 MON1AQ86VX9 555 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 TTC30AQ86WT1 665 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 ZNF276Q8N554 614 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 DCLK2Q8N568 766 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 ZMIZ2Q8NF64 920 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 DEPDC1BQ8WUY9 529 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 FAM3CQ92520 227 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 IRF7Q92985 503 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 ZFYVE19Q96K21 471 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 NOX5Q96PH1 765 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 GCNAQ96QF7 691 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 NELL2Q99435 816 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 ZSWIM1Q9BR11 485 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 TTYH3Q9C0H2 523 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 ATXN3LQ9H3M9 355 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 NLRC4Q9NPP4 1024 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 AJAP1Q9UKB5 411 aaPredicted RBP11.63□□□□□ -0.55
LINC01228-201ENST00000567966 SCML2Q9UQR0 700 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 LUC7L2Q9Y383 392 aaKnown RBP11.63□□□□□ -0.55
LINC01228-201ENST00000567966 CEP83Q9Y592 693 aa11.63□□□□□ -0.55
LINC01228-201ENST00000567966 DENND4CQ5VZ89 1909 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 OBSL1O75147 1896 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 BEST1O76090 585 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 FBXO21O94952 628 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 PRAMEF12O95522 483 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 LSM8O95777 96 aaKnown RBP11.62□□□□□ -0.55
LINC01228-201ENST00000567966 TPM1P09493 284 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 BRD2P25440 801 aaKnown RBP11.62□□□□□ -0.55
LINC01228-201ENST00000567966 RPS9P46781 194 aaKnown RBP11.62□□□□□ -0.55
LINC01228-201ENST00000567966 SOX9P48436 509 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 SLC5A3P53794 718 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 FOXK1P85037 733 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 CDR2Q01850 454 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 PDE4CQ08493 712 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 MTAPQ13126 283 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 GOLGA7BQ2TAP0 167 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 DNTTIP2Q5QJE6 756 aaKnown RBP11.62□□□□□ -0.55
LINC01228-201ENST00000567966 SDHAF4Q5VUM1 108 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 PM20D1Q6GTS8 502 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 PPP1R2P3Q6NXS1 205 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 TRIM72Q6ZMU5 477 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 IRF2BP2Q7Z5L9 587 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 TMEM110Q86TL2 294 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 PIGZQ86VD9 579 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 SLC47A2Q86VL8 602 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 VSTM4Q8IW00 320 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 ARHGAP18Q8N392 663 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 SUMF1Q8NBK3 374 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 TMEM35BQ8NCS4 154 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 CCDC112Q8NEF3 446 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 TTC8Q8TAM2 541 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 DDX1Q92499 740 aaKnown RBP11.62□□□□□ -0.55
LINC01228-201ENST00000567966 BAP1Q92560 729 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 MRPS31Q92665 395 aaKnown RBP11.62□□□□□ -0.55
LINC01228-201ENST00000567966 E2F7Q96AV8 911 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 MIS12Q9H081 205 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 SMG9Q9H0W8 520 aaKnown RBP11.62□□□□□ -0.55
LINC01228-201ENST00000567966 SEMA4AQ9H3S1 761 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 TASP1Q9H6P5 420 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 LRRC4Q9HBW1 653 aa11.62□□□□□ -0.55
LINC01228-201ENST00000567966 TRPV5Q9NQA5 729 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms