RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 CCDC163A0A0D9SF12 145 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 TBC1D3BA6NDS4 549 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 PRR5-ARHGAP8B1AHC4 643 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 BIN1O00499 593 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 GADD45BO75293 160 aaPredicted RBP12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 HMBSP08397 361 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 KCNA4P22459 653 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 ATP5C1P36542 298 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 TUBP50607 506 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 KIF11P52732 1056 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 RAD23BP54727 409 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 ARHGAP8P85298 464 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 FOXK2Q01167 660 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 CSRP2Q16527 193 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 PLK5Q496M5 336 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 C10orf120Q5SQS8 335 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 BTBD8Q5XKL5 378 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 KLHL10Q6JEL2 608 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 SCD5Q86SK9 330 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 MIB1Q86YT6 1006 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 NDRG1Q92597 394 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 TMEM176AQ96HP8 235 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 DUSP16Q9BY84 665 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 SPHK2Q9NRA0 654 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 MAN1B1Q9UKM7 699 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 MMP17Q9ULZ9 603 aa12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 NEDD8-MDP1E9PL57 170 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 TULP2O00295 520 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 STX10O60499 249 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 GREM1O60565 184 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 TULP3O75386 442 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 CD19P15391 556 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 BCKDHBP21953 392 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 GRIA2P42262 883 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 FKBP3Q00688 224 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 ENPEPQ07075 957 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 CRY1Q16526 586 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 GOLGA7BQ2TAP0 167 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 AASDHQ4L235 1098 aaPredicted RBP12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 C10orf76Q5T2E6 689 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 TCEAL6Q6IPX3 200 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 PIGZQ86VD9 579 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 ABCA7Q8IZY2 2146 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 PHTF2Q8N3S3 785 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 IL17RCQ8NAC3 791 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 MDGA1Q8NFP4 955 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 RLN3Q8WXF3 142 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 TCEAL3Q969E4 200 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 DUSP15Q9H1R2 295 aaPredicted RBP12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 CYLDQ9NQC7 956 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 PLK2Q9NYY3 685 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 DEC1Q9P2X7 70 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 ARMCX3Q9UH62 379 aaPredicted RBP12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 RASAL2Q9UJF2 1139 aa12.87□□□□□ -0.35
GTF3C1-208ENST00000567843 SPAG17Q6Q759 2223 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 SLC16A3O15427 465 aaKnown RBP12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 LRP3O75074 770 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 EPN2O95208 641 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 CALCAP01258 141 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 KIR2DL1P43626 348 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 STX17P56962 302 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 MRPS21P82921 87 aaKnown RBP12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 CREB5Q02930 508 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 EFEMP1Q12805 493 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 CUL2Q13617 745 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 HTR3DQ70Z44 454 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 ETFBKMTQ8IXQ9 262 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 PGBD3Q8N328 593 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 FRMD1Q8N878 549 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 KIAA1958Q8N8K9 716 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 C12orf50Q8NA57 414 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 CCDC26Q8TAB7 109 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 SPATA20Q8TB22 786 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 UBA3Q8TBC4 463 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 OTUB2Q96DC9 234 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 TIGD1Q96MW7 591 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 BBS2Q9BXC9 721 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 DNAI2Q9GZS0 605 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 DNAJC17Q9NVM6 304 aaKnown RBP12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 BCCIPQ9P287 314 aaKnown RBP eCLIP12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 EBF1Q9UH73 591 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 DNMT3LQ9UJW3 386 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 LSM7Q9UK45 103 aaKnown RBP12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 RALGAPA1Q6GYQ0 2036 aa12.86□□□□□ -0.35
GTF3C1-208ENST00000567843 MYO18AQ92614 2054 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 PSMA7O14818 248 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 HOXC11O43248 304 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 ADAM23O75077 832 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 CHRM1P11229 460 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 RALAP11233 206 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 TYRP14679 529 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 BMP6P22004 513 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 MPLP40238 635 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 EIF2DP41214 584 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 PLA2G4AP47712 749 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 TKTL1P51854 596 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 MCCD1P59942 119 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 LRRC63Q05C16 580 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms