RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 LETMD1Q6P1Q0 360 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 TMEM270Q6UE05 265 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 ENOSF1Q7L5Y1 443 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 CATSPER4Q7RTX7 472 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 SLFN11Q7Z7L1 901 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 PHLDB2Q86SQ0 1253 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 CREG2Q8IUH2 290 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 PASD1Q8IV76 773 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 RNF10Q8N5U6 811 aaKnown RBP6.1□□□□□ -1.43
SF3B3-210ENST00000567654 C7orf31Q8N865 590 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 ARRDC4Q8NCT1 418 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 BAHD1Q8TBE0 780 aaPredicted RBP6.1□□□□□ -1.43
SF3B3-210ENST00000567654 SLC35G2Q8TBE7 412 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 TFAP2BQ92481 460 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 C18orf25Q96B23 403 aaPredicted RBP6.1□□□□□ -1.43
SF3B3-210ENST00000567654 ANKRD36BP1Q96IX9 119 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 SNX27Q96L92 541 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 NOX5Q96PH1 765 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 OSBPL9Q96SU4 736 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 KATNAL1Q9BW62 490 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 APOL6Q9BWW8 343 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 GCOM2Q9BZD3 368 aaPredicted RBP6.1□□□□□ -1.43
SF3B3-210ENST00000567654 XPNPEP3Q9NQH7 507 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 INTUQ9ULD6 942 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 PIN4Q9Y237 131 aaKnown RBP6.1□□□□□ -1.43
SF3B3-210ENST00000567654 SAR1BQ9Y6B6 198 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 CDY2AQ9Y6F7 541 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 LTBP2Q14767 1821 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 ANKRD62A6NC57 917 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 EFCAB8A8MWE9 144 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 PRR33A8MZF0 331 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 HCRTO43612 131 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 MGEA5O60502 916 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 RTN2O75298 545 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 RECQL4O94761 1208 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 CLSTN1O94985 981 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 GJB6O95452 261 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 TNNC2P02585 160 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 HMGCRP04035 888 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 CYP1A1P04798 512 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-210ENST00000567654 KRT19P08727 400 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 ITIH2P19823 946 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 CST5P28325 142 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-210ENST00000567654 NOP2P46087 812 aaKnown RBP6.09□□□□□ -1.43
SF3B3-210ENST00000567654 GJA8P48165 433 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 MARCKSL1P49006 195 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 CRYBB1P53674 252 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-210ENST00000567654 AP3M2P53677 418 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 NAP1L1P55209 391 aaKnown RBP6.09□□□□□ -1.43
SF3B3-210ENST00000567654 NOMO3P69849 1222 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 MRPS6P82932 125 aaKnown RBP6.09□□□□□ -1.43
SF3B3-210ENST00000567654 PTP4A2Q12974 167 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 TMEM132DQ14C87 1099 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 ZBTB6Q15916 424 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 KCTD19Q17RG1 926 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-210ENST00000567654 WHAMMP3Q1A5X7 153 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 SGSM1Q2NKQ1 1148 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 TRIM71Q2Q1W2 868 aaKnown RBP6.09□□□□□ -1.43
SF3B3-210ENST00000567654 DCAF4L1Q3SXM0 396 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 FAM47CQ5HY64 1035 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 DCAF12L1Q5VU92 463 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 NAA35Q5VZE5 725 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 ACAD10Q6JQN1 1059 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 NOTUMQ6P988 496 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 SLC27A1Q6PCB7 646 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 FBXO38Q6PIJ6 1188 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 ALKAL1Q6UXT8 129 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 NT5DC3Q86UY8 548 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 SERINC5Q86VE9 423 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 VPS36Q86VN1 386 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 WDTC1Q8N5D0 677 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 MNS1Q8NEH6 495 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 GIMAP7Q8NHV1 300 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 CPA5Q8WXQ8 436 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 RFFLQ8WZ73 363 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 ZNF653Q96CK0 615 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 CYFIP2Q96F07 1278 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 ACAP3Q96P50 834 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 ALS2CR12Q96Q35 445 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 FERD3LQ96RJ6 166 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 PNKPQ96T60 521 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 CELF4Q9BZC1 486 aaKnown RBP6.09□□□□□ -1.43
SF3B3-210ENST00000567654 TRIM7Q9C029 511 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 SENP6Q9GZR1 1112 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-210ENST00000567654 ELOVL4Q9GZR5 314 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 ANKZF1Q9H8Y5 726 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 AGO3Q9H9G7 860 aaKnown RBP6.09□□□□□ -1.43
SF3B3-210ENST00000567654 GOLGA2P5Q9HBQ8 144 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 CISHQ9NSE2 258 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 TRMT13Q9NUP7 481 aaKnown RBP6.09□□□□□ -1.43
SF3B3-210ENST00000567654 DPP3Q9NY33 737 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 CACNG4Q9UBN1 327 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 DDX20Q9UHI6 824 aaKnown RBP6.09□□□□□ -1.43
SF3B3-210ENST00000567654 CYTH4Q9UIA0 394 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 TPX2Q9ULW0 747 aaKnown RBP6.09□□□□□ -1.43
SF3B3-210ENST00000567654 JRKLQ9Y4A0 524 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 TRPV2Q9Y5S1 764 aa6.09□□□□□ -1.43
SF3B3-210ENST00000567654 SHROOM3Q8TF72 1996 aa6.08□□□□□ -1.44
SF3B3-210ENST00000567654 TMEM110-MUSTN1A8MSY1 372 aa6.08□□□□□ -1.44
SF3B3-210ENST00000567654 THAP12O43422 761 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms