RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 WDR35Q9P2L0 1181 aa15.83■□□□□ 0.12
RNF40-209ENST00000566703 EVLQ9UI08 416 aaPredicted RBP15.83■□□□□ 0.12
RNF40-209ENST00000566703 LSM7Q9UK45 103 aaKnown RBP15.83■□□□□ 0.12
RNF40-209ENST00000566703 ANGPTL2Q9UKU9 493 aa15.83■□□□□ 0.12
RNF40-209ENST00000566703 EML5Q05BV3 1969 aa15.83■□□□□ 0.12
RNF40-209ENST00000566703 C4orf47A7E2U8 309 aa15.82■□□□□ 0.12
RNF40-209ENST00000566703 MAP3K13O43283 966 aa15.82■□□□□ 0.12
RNF40-209ENST00000566703 GREM1O60565 184 aa15.82■□□□□ 0.12
RNF40-209ENST00000566703 PSMC2P35998 433 aaKnown RBP15.82■□□□□ 0.12
RNF40-209ENST00000566703 PGFP49763 221 aa15.82■□□□□ 0.12
RNF40-209ENST00000566703 KDSRQ06136 332 aa15.82■□□□□ 0.12
RNF40-209ENST00000566703 DPYDQ12882 1025 aa15.82■□□□□ 0.12
RNF40-209ENST00000566703 MAP7D1Q3KQU3 841 aa15.82■□□□□ 0.12
RNF40-209ENST00000566703 CLEC20AQ6ZU45 233 aa15.82■□□□□ 0.12
RNF40-209ENST00000566703 TTC30AQ86WT1 665 aa15.82■□□□□ 0.12
RNF40-209ENST00000566703 TTC39CQ8N584 583 aa15.82■□□□□ 0.12
RNF40-209ENST00000566703 ZNF513Q8N8E2 541 aaPredicted RBP15.82■□□□□ 0.12
RNF40-209ENST00000566703 NAT16Q8N8M0 369 aa15.82■□□□□ 0.12
RNF40-209ENST00000566703 TERB1Q8NA31 727 aa15.82■□□□□ 0.12
RNF40-209ENST00000566703 CCDC150Q8NCX0 1101 aa15.82■□□□□ 0.12
RNF40-209ENST00000566703 WBP2Q969T9 261 aa15.82■□□□□ 0.12
RNF40-209ENST00000566703 CHAMP1Q96JM3 812 aa15.82■□□□□ 0.12
RNF40-209ENST00000566703 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.82■□□□□ 0.12
RNF40-209ENST00000566703 FAM49BQ9NUQ9 324 aa15.82■□□□□ 0.12
RNF40-209ENST00000566703 BCCIPQ9P287 314 aaKnown RBP eCLIP15.82■□□□□ 0.12
RNF40-209ENST00000566703 HMGXB4Q9UGU5 601 aa15.82■□□□□ 0.12
RNF40-209ENST00000566703 A0A1W2PQ27 194 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 A0A1W2PQ64 194 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 A0A1W2PQD8 194 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 LNP1A1A4G5 178 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 ZBTB24O43167 697 aaPredicted RBP15.81■□□□□ 0.12
RNF40-209ENST00000566703 CACNG3O60359 315 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 CILPO75339 1184 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 TBX18O95935 607 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 ACO1P21399 889 aaKnown RBP15.81■□□□□ 0.12
RNF40-209ENST00000566703 KCNA4P22459 653 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 ADORA2BP29275 332 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 NTSR1P30989 418 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 GCLMP48507 274 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 DHPSP49366 369 aaPredicted RBP15.81■□□□□ 0.12
RNF40-209ENST00000566703 NDUFA8P51970 172 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 PPP3CAQ08209 521 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 ORC1Q13415 861 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 ADAM9Q13443 819 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 GRAMD4Q6IC98 578 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 SDE2Q6IQ49 451 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 SLC36A4Q6YBV0 504 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 WDR87Q6ZQQ6 2873 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 KIAA1549LQ6ZVL6 1849 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 TADA2BQ86TJ2 420 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 FAM186BQ8IYM0 893 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 SPRYD3Q8NCJ5 442 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 PIGKQ92643 395 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 TWNKQ96RR1 684 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 DUSP16Q9BY84 665 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 NIF3L1Q9GZT8 377 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 SCAND2PQ9GZW5 306 aaPredicted RBP15.81■□□□□ 0.12
RNF40-209ENST00000566703 FAM124BQ9H5Z6 455 aaPredicted RBP15.81■□□□□ 0.12
RNF40-209ENST00000566703 APOBEC3GQ9HC16 384 aaKnown RBP15.81■□□□□ 0.12
RNF40-209ENST00000566703 TMEM8AQ9HCN3 771 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 TMEM9BQ9NQ34 198 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.81■□□□□ 0.12
RNF40-209ENST00000566703 CLIC5Q9NZA1 410 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 DNMT3LQ9UJW3 386 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 ATP6V1DQ9Y5K8 247 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 USP3Q9Y6I4 520 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 DNAH14Q0VDD8 3507 aa15.81■□□□□ 0.12
RNF40-209ENST00000566703 MYO16Q9Y6X6 1858 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 TCRBV21S2A2A0A5A6 115 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 CDX4O14627 284 aaPredicted RBP15.8■□□□□ 0.12
RNF40-209ENST00000566703 IRF1P10914 325 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 RARGP13631 454 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 CSRP1P21291 193 aaKnown RBP15.8■□□□□ 0.12
RNF40-209ENST00000566703 HOXD12P35452 270 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 KIF11P52732 1056 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 IRX4P78413 519 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 LMAN2Q12907 356 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 EDRF1Q3B7T1 1238 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 C10orf76Q5T2E6 689 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 KRBA2Q6ZNG9 492 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 GPRIN1Q7Z2K8 1008 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 CCDC186Q7Z3E2 898 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 SYT12Q8IV01 421 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 PGBD3Q8N328 593 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 TAS1R2Q8TE23 839 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 HMGB4Q8WW32 186 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 RLN3Q8WXF3 142 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 CCDC34Q96HJ3 373 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 CDK5RAP1Q96SZ6 601 aaKnown RBP15.8■□□□□ 0.12
RNF40-209ENST00000566703 BBS2Q9BXC9 721 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 UBXN6Q9BZV1 441 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 NMUR1Q9HB89 426 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 DNAJC17Q9NVM6 304 aaKnown RBP15.8■□□□□ 0.12
RNF40-209ENST00000566703 OSER1Q9NX31 292 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 ZNF510Q9Y2H8 683 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 ZDHHC9Q9Y397 364 aa15.8■□□□□ 0.12
RNF40-209ENST00000566703 GFRA2O00451 464 aa15.79■□□□□ 0.12
RNF40-209ENST00000566703 ZNF217O75362 1048 aa15.79■□□□□ 0.12
RNF40-209ENST00000566703 PRR29P0C7W0 189 aa15.79■□□□□ 0.12
RNF40-209ENST00000566703 RALAP11233 206 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms