RNA–Protein interactions for RNA: ENST00000566480.5

SCAMP2-207, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 2,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-207ENST00000566480 LPPQ93052 612 aa12.73□□□□□ -0.37
SCAMP2-207ENST00000566480 WNT8BQ93098 351 aa12.73□□□□□ -0.37
SCAMP2-207ENST00000566480 FAM149B1Q96BN6 582 aa12.73□□□□□ -0.37
SCAMP2-207ENST00000566480 TTC25Q96NG3 672 aa12.73□□□□□ -0.37
SCAMP2-207ENST00000566480 TGS1Q96RS0 853 aaKnown RBP12.73□□□□□ -0.37
SCAMP2-207ENST00000566480 RAB6BQ9NRW1 208 aa12.73□□□□□ -0.37
SCAMP2-207ENST00000566480 SAMD15Q9P1V8 674 aa12.73□□□□□ -0.37
SCAMP2-207ENST00000566480 RABGEF1Q9UJ41 708 aa12.73□□□□□ -0.37
SCAMP2-207ENST00000566480 MYO18AQ92614 2054 aaKnown RBP12.73□□□□□ -0.37
SCAMP2-207ENST00000566480 RALGAPA2Q2PPJ7 1873 aa12.73□□□□□ -0.37
SCAMP2-207ENST00000566480 LAMA2P24043 3122 aaKnown RBP12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 PTGESO14684 152 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 APOL1O14791 398 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 PGK1P00558 417 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 HSPA1AP0DMV8 641 aaKnown RBP12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 HSPA1BP0DMV9 641 aaKnown RBP12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 WDR4P57081 412 aaKnown RBP12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 PURAQ00577 322 aaKnown RBP12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 BST2Q10589 180 aaKnown RBP12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 BOLA3Q53S33 107 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 CXCL17Q6UXB2 119 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 PIGWQ7Z7B1 504 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 PCGF5Q86SE9 256 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 FAM131BQ86XD5 332 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 MAP7D3Q8IWC1 876 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 PALM2Q8IXS6 379 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 FAF2Q96CS3 445 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 TRIM56Q9BRZ2 755 aaKnown RBP12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 TRABDQ9H4I3 376 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 CCDC134Q9H6E4 229 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 USP29Q9HBJ7 922 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 NKIRAS1Q9NYS0 192 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 HUS1O60921 280 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 CD4P01730 458 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 CYP2F1P24903 491 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 FOXN2P32314 431 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 RPA3P35244 121 aaPredicted RBP12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 ELK3P41970 407 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 CDC42EP1Q00587 391 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 ADIGQ0VDE8 80 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 SLC10A2Q12908 348 aaPredicted RBP12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 TFDP2Q14188 446 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 WSCD1Q658N2 575 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 YTHDF3Q7Z739 585 aaKnown RBP12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 PIGZQ86VD9 579 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 UNC93AQ86WB7 457 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 PDIK1LQ8N165 341 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 AGGF1Q8N302 714 aaeCLIP12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 TBCBQ99426 244 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 ETNK2Q9NVF9 386 aa12.72□□□□□ -0.37
SCAMP2-207ENST00000566480 TNPO2O14787 897 aaKnown RBP12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 MLH1P40692 756 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 CRYBB1P53674 252 aaPredicted RBP12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 BCAT1P54687 386 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 FAM47CQ5HY64 1035 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 GNASQ5JWF2 1037 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 ARHGAP17Q68EM7 881 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 B3GALNT2Q8NCR0 500 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 CKAP2Q8WWK9 683 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 ABCF3Q9NUQ8 709 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 GRID1Q9ULK0 1009 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 ZNF638Q14966 1978 aaKnown RBP12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 FAM47DPA6NHR8 397 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 DPYSL4O14531 572 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 CYB561D2O14569 222 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 ZBED1O96006 694 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 APRTP07741 180 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 KRT4P19013 534 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 L1CAMP32004 1257 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 FAM133BQ5BKY9 247 aaKnown RBP12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 KIAA0319Q5VV43 1072 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 ARHGEF18Q6ZSZ5 1173 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 CEP128Q6ZU80 1094 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 FUKQ8N0W3 1084 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 CRYBG2Q8N1P7 616 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 ANKS4BQ8N8V4 417 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 ATP11CQ8NB49 1132 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 TRPV1Q8NER1 839 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 CCT6BQ92526 530 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 ZNF560Q96MR9 790 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 GAD1Q99259 594 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 PAFAH2Q99487 392 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 PAAF1Q9BRP4 392 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 FRMD8P1Q9BZ68 369 aaPredicted RBP12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 ARHGAP39Q9C0H5 1083 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 NRDE2Q9H7Z3 1164 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 AP4E1Q9UPM8 1137 aa12.71□□□□□ -0.37
SCAMP2-207ENST00000566480 PDCD11Q14690 1871 aaKnown RBP12.71□□□□□ -0.38
SCAMP2-207ENST00000566480 ATXN2Q99700 1313 aaKnown RBP12.71□□□□□ -0.38
SCAMP2-207ENST00000566480 KBTBD13C9JR72 458 aa12.7□□□□□ -0.38
SCAMP2-207ENST00000566480 SNX3O60493 162 aa12.7□□□□□ -0.38
SCAMP2-207ENST00000566480 SETSIPP0DME0 302 aa12.7□□□□□ -0.38
SCAMP2-207ENST00000566480 GOT1P17174 413 aa12.7□□□□□ -0.38
SCAMP2-207ENST00000566480 CA4P22748 312 aa12.7□□□□□ -0.38
SCAMP2-207ENST00000566480 AMPD1P23109 780 aa12.7□□□□□ -0.38
SCAMP2-207ENST00000566480 AXLP30530 894 aa12.7□□□□□ -0.38
SCAMP2-207ENST00000566480 STIP1P31948 543 aaKnown RBP12.7□□□□□ -0.38
SCAMP2-207ENST00000566480 GEMIN4P57678 1058 aaKnown RBP12.7□□□□□ -0.38
SCAMP2-207ENST00000566480 RNASELQ05823 741 aaKnown RBP12.7□□□□□ -0.38
SCAMP2-207ENST00000566480 NOGQ13253 232 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms