RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 TRIM49P0CI25 452 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 TRIM49CP0CI26 452 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 CCDC192P0DO97 292 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 ELF2Q15723 593 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 LPAL2Q16609 132 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 EOGTQ5NDL2 527 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 BTBD8Q5XKL5 378 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 ARHGAP18Q8N392 663 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 IL17RCQ8NAC3 791 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 TSTD1Q8NFU3 115 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 TMEM176AQ96HP8 235 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 METTL14Q9HCE5 456 aaKnown RBP16■□□□□ 0.15
CMTM3-212ENST00000566121 ARHGEF4Q9NR80 690 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 CISHQ9NSE2 258 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 DEC1Q9P2X7 70 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 DNMT3LQ9UJW3 386 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 FBXO10Q9UK96 956 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 RALGAPA1Q6GYQ0 2036 aa16■□□□□ 0.15
CMTM3-212ENST00000566121 MYO18AQ92614 2054 aaKnown RBP15.99■□□□□ 0.15
CMTM3-212ENST00000566121 KIAA1549LQ6ZVL6 1849 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 GOLGA6L4A6NEF3 574 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 CACNG3O60359 315 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 ACO1P21399 889 aaKnown RBP15.99■□□□□ 0.15
CMTM3-212ENST00000566121 HOXC13P31276 330 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 SLC6A11P48066 632 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 PGFP49763 221 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 COG7P83436 770 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 BYSLQ13895 437 aaKnown RBP15.99■□□□□ 0.15
CMTM3-212ENST00000566121 PPP1R26Q5T8A7 1209 aaPredicted RBP15.99■□□□□ 0.15
CMTM3-212ENST00000566121 PM20D1Q6GTS8 502 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 Q6ZNB5 142 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 BBS7Q8IWZ6 715 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 ANKRD52Q8NB46 1076 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 SLC4A11Q8NBS3 891 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 SEMA4DQ92854 862 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 DHTKD1Q96HY7 919 aaPredicted RBP15.99■□□□□ 0.15
CMTM3-212ENST00000566121 HHIPQ96QV1 700 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 TSG101Q99816 390 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.99■□□□□ 0.15
CMTM3-212ENST00000566121 FAM49BQ9NUQ9 324 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 OSER1Q9NX31 292 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 MYO16Q9Y6X6 1858 aa15.99■□□□□ 0.15
CMTM3-212ENST00000566121 MYOFQ9NZM1 2061 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 BCLAF3A2AJT9 711 aaKnown RBP15.98■□□□□ 0.15
CMTM3-212ENST00000566121 P4HA2O15460 535 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 TULP3O75386 442 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 DPP6P42658 865 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 PXNP49023 591 aaPredicted RBP15.98■□□□□ 0.15
CMTM3-212ENST00000566121 RAD23BP54727 409 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 YWHAEP62258 255 aaKnown RBP15.98■□□□□ 0.15
CMTM3-212ENST00000566121 IFRD2Q12894 506 aaPredicted RBP15.98■□□□□ 0.15
CMTM3-212ENST00000566121 PNOCQ13519 176 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 E2F5Q15329 346 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 C2orf27AQ580R0 203 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 PMS2CLQ68D20 193 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 GPRIN1Q7Z2K8 1008 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 SCD5Q86SK9 330 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 TMEM25Q86YD3 366 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 SCML4Q8N228 414 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 TERB1Q8NA31 727 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 ELMO3Q96BJ8 720 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 CEP63Q96MT8 703 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 XPO6Q96QU8 1125 aaKnown RBP15.98■□□□□ 0.15
CMTM3-212ENST00000566121 DCLK3Q9C098 648 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 ARRDC1-AS1Q9H2J1 176 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 GDPD2Q9HCC8 539 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 POLMQ9NP87 494 aaPredicted RBP15.98■□□□□ 0.15
CMTM3-212ENST00000566121 LSM7Q9UK45 103 aaKnown RBP15.98■□□□□ 0.15
CMTM3-212ENST00000566121 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.98■□□□□ 0.15
CMTM3-212ENST00000566121 EML5Q05BV3 1969 aa15.98■□□□□ 0.15
CMTM3-212ENST00000566121 MED19A0JLT2 244 aaPredicted RBP15.97■□□□□ 0.15
CMTM3-212ENST00000566121 GFRA2O00451 464 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 NPC1O15118 1278 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 TBX18O95935 607 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 RALAP11233 206 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 RARGP13631 454 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 ADORA2BP29275 332 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 P2RY2P41231 377 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 ZNF132P52740 706 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 SLC8A3P57103 927 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 MESP2Q0VG99 397 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 ANKRD40Q6AI12 368 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 TMEM92Q6UXU6 159 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 C12orf40Q86WS4 652 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 TTC16Q8NEE8 873 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 SMARCE1Q969G3 411 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 SLC35C1Q96A29 364 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 HEXIM2Q96MH2 286 aaKnown RBP15.97■□□□□ 0.15
CMTM3-212ENST00000566121 IRX2Q9BZI1 471 aaPredicted RBP15.97■□□□□ 0.15
CMTM3-212ENST00000566121 NACA2Q9H009 215 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 NMUR1Q9HB89 426 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 ARMCX3Q9UH62 379 aaPredicted RBP15.97■□□□□ 0.15
CMTM3-212ENST00000566121 SLC27A6Q9Y2P4 619 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 ABCA7Q8IZY2 2146 aa15.97■□□□□ 0.15
CMTM3-212ENST00000566121 A0A1W2PQH9 124 aa15.96■□□□□ 0.15
CMTM3-212ENST00000566121 TBC1D3BA6NDS4 549 aa15.96■□□□□ 0.15
CMTM3-212ENST00000566121 SGK1O00141 431 aa15.96■□□□□ 0.15
CMTM3-212ENST00000566121 CYP26A1O43174 497 aa15.96■□□□□ 0.15
CMTM3-212ENST00000566121 ADAM23O75077 832 aa15.96■□□□□ 0.15
CMTM3-212ENST00000566121 CLSTN1O94985 981 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms