RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 TLR8Q9NR97 1041 aaKnown RBP13.24□□□□□ -0.29
SF3B3-206ENST00000565990 ASNSD1Q9NWL6 643 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 CLIC5Q9NZA1 410 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 TRPM5Q9NZQ8 1165 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 ZMYM5Q9UJ78 669 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 CDH22Q9UJ99 828 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 USP15Q9Y4E8 981 aaPredicted RBP13.24□□□□□ -0.29
SF3B3-206ENST00000565990 CLUHO75153 1309 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 YJEFN3A6XGL0 299 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 E7ENQ6 273 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 PIK3R2O00459 728 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 SART1O43290 800 aaKnown RBP13.23□□□□□ -0.29
SF3B3-206ENST00000565990 AKR1B10O60218 316 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 KIF5CO60282 957 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 URI1O94763 535 aaPredicted RBP13.23□□□□□ -0.29
SF3B3-206ENST00000565990 ZRANB2O95218 330 aaKnown RBP eCLIP13.23□□□□□ -0.29
SF3B3-206ENST00000565990 OLFM2O95897 454 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 GLI1P08151 1106 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 MYL4P12829 197 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 FSHRP23945 695 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 DDX6P26196 483 aaKnown RBP eCLIP13.23□□□□□ -0.296e-17■□□□□ 10.3
SF3B3-206ENST00000565990 TUBP50607 506 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 GNG11P61952 73 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 GFPT1Q06210 699 aaPredicted RBP13.23□□□□□ -0.29
SF3B3-206ENST00000565990 BRD3Q15059 726 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 TDRD12Q587J7 1177 aaKnown RBP13.23□□□□□ -0.29
SF3B3-206ENST00000565990 EFHC1Q5JVL4 640 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 ALKBH5Q6P6C2 394 aaKnown RBP13.23□□□□□ -0.29
SF3B3-206ENST00000565990 KLHDC10Q6PID8 442 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 OLFML1Q6UWY5 402 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 RSRC2Q7L4I2 434 aaKnown RBP13.23□□□□□ -0.29
SF3B3-206ENST00000565990 XYLT1Q86Y38 959 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 ARHGAP18Q8N392 663 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 MSANTD4Q8NCY6 345 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 ITFG1Q8TB96 612 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 CLEC4CQ8WTT0 213 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 GOLGA1Q92805 767 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 FBXO32Q969P5 355 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 SLC46A2Q9BY10 475 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 POMKQ9H5K3 350 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 NMUR1Q9HB89 426 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 PRDM6Q9NQX0 595 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 SEPT11Q9NVA2 429 aaKnown RBP13.23□□□□□ -0.29
SF3B3-206ENST00000565990 OSER1Q9NX31 292 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.23□□□□□ -0.29
SF3B3-206ENST00000565990 ADAM22Q9P0K1 906 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 GMIPQ9P107 970 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 WDR35Q9P2L0 1181 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 TMEM59LQ9UK28 342 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 PRDM4Q9UKN5 801 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 STRIP2Q9ULQ0 834 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 USTQ9Y2C2 406 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 ADGRG1Q9Y653 693 aa13.23□□□□□ -0.29
SF3B3-206ENST00000565990 ZFP37Q9Y6Q3 630 aaPredicted RBP13.23□□□□□ -0.29
SF3B3-206ENST00000565990 A0A1W2PRU2 124 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 ZNF263O14978 683 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 CALB1P05937 261 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 YWHAGP61981 247 aaKnown RBP eCLIP13.22□□□□□ -0.29
SF3B3-206ENST00000565990 YWHAZP63104 245 aaKnown RBP13.22□□□□□ -0.29
SF3B3-206ENST00000565990 CLUL1Q15846 466 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 ERCC6LQ2NKX8 1250 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 ARHGAP29Q52LW3 1261 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 PPP1R15BQ5SWA1 713 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 C10orf76Q5T2E6 689 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 BSPRYQ5W0U4 402 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 MMS22LQ6ZRQ5 1243 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 HFE2Q6ZVN8 426 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 FAM183BPQ6ZVS7 135 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 SLC26A9Q7LBE3 791 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 IPO4Q8TEX9 1081 aaKnown RBP13.22□□□□□ -0.29
SF3B3-206ENST00000565990 FGF13Q92913 245 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 ZSWIM3Q96MP5 696 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 RNF38Q9H0F5 515 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 ATXN3LQ9H3M9 355 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 TASP1Q9H6P5 420 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 GDE1Q9NZC3 331 aa13.22□□□□□ -0.29
SF3B3-206ENST00000565990 MRPS23Q9Y3D9 190 aaKnown RBP13.22□□□□□ -0.29
SF3B3-206ENST00000565990 EPN1Q9Y6I3 576 aaPredicted RBP13.22□□□□□ -0.29
SF3B3-206ENST00000565990 NUP210Q8TEM1 1887 aaPredicted RBP13.22□□□□□ -0.29
SF3B3-206ENST00000565990 A0A1W2PQH9 124 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 CCDC151A5D8V7 595 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 ANKRD62A6NC57 917 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 SIGLEC16A6NMB1 481 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 TMCO5BA8MYB1 307 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 EIF3CLB5ME19 914 aaKnown RBP13.21□□□□□ -0.29
SF3B3-206ENST00000565990 OAS1P00973 400 aaKnown RBP13.21□□□□□ -0.29
SF3B3-206ENST00000565990 LTFP02788 710 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 GJA1P17302 382 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 CLCN6P51797 869 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 TFF2Q03403 129 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 IFRD2Q12894 506 aaPredicted RBP13.21□□□□□ -0.29
SF3B3-206ENST00000565990 TAF5Q15542 800 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 TEAD2Q15562 447 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 WHAMMP3Q1A5X7 153 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 AAK1Q2M2I8 961 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 C2CD6Q53TS8 623 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 CCDC122Q5T0U0 273 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 HECTD3Q5T447 861 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 TXNDC8Q6A555 127 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 OR6B2Q6IFH4 312 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms