RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 PIAS3Q9Y6X2 628 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 IRS2Q9Y4H2 1338 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 A0A1W2PP55 124 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 E9PBE3 544 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 VILLO15195 856 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 ZW10O43264 779 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 ASNA1O43681 348 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SYNCRIPO60506 623 aaKnown RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 MMP2P08253 660 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SNRPB2P08579 225 aaKnown RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 POLR2MP0CAP2 368 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 CCDC192P0DO97 292 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 LAG3P18627 525 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 KRT15P19012 456 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 BTF3P20290 206 aaKnown RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 MSNP26038 577 aaKnown RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 TARSP26639 723 aaKnown RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 CDC25BP30305 580 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 HOXA10P31260 410 aaPredicted RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 ALDH3A2P51648 485 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 PMS2P54278 862 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 PRKAA2P54646 552 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 TRA2BP62995 288 aaKnown RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 DLG4P78352 724 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 TBC1D8BQ0IIM8 1120 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SEC23AQ15436 765 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 TEAD4Q15561 434 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SYT16Q17RD7 645 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 MPEG1Q2M385 716 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 DPY19L1Q2PZI1 675 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 FBXO48Q5FWF7 155 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 DCLRE1AQ6PJP8 1040 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 TXNDC11Q6PKC3 985 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 CLEC2AQ6UVW9 174 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 B3GNT9Q6UX72 402 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 USP51Q70EK9 711 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SV2BQ7L1I2 683 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 OTOP1Q7RTM1 612 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 TADA2BQ86TJ2 420 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 ARMC8Q8IUR7 673 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SIX6OS1Q8N1H7 587 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 BBS5Q8N3I7 341 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 MPP5Q8N3R9 675 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 MEIOBQ8N635 442 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 CCDC150Q8NCX0 1101 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 ZFAND2BQ8WV99 257 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SEPT1Q8WYJ6 367 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 LRRC45Q96CN5 670 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 FAM167AQ96KS9 214 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 TCF25Q9BQ70 676 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 ZPBPQ9BS86 351 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SENP2Q9HC62 589 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 TCF7L1Q9HCS4 588 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 IL1RAPL2Q9NP60 686 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SERPINB13Q9UIV8 391 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 FEM1BQ9UK73 627 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 RIMKLBQ9ULI2 386 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SATB2Q9UPW6 733 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 CARMIL3Q8ND23 1372 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 GOLGB1Q14789 3259 aaKnown RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 A0A1B0GUA9 196 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 UPK3BL1B0FP48 263 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 ERVV-2B6SEH9 535 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 UPK3BL2E5RIL1 263 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 MAPK13O15264 365 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 XYLBO75191 536 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 IL18RAPO95256 599 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 HTR3BO95264 441 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 KRT14P02533 472 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 CYP2E1P05181 493 aaPredicted RBP3.21□□□□□ -1.89
CHD9-216ENST00000565803 DLDP09622 509 aaKnown RBP3.21□□□□□ -1.89
CHD9-216ENST00000565803 KRT2P35908 639 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 RARSP54136 660 aaKnown RBP3.21□□□□□ -1.89
CHD9-216ENST00000565803 KCNJ10P78508 379 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 COG7P83436 770 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 SMAD3P84022 425 aaKnown RBP3.21□□□□□ -1.89
CHD9-216ENST00000565803 DHX9Q08211 1270 aaKnown RBP3.21□□□□□ -1.89
CHD9-216ENST00000565803 ZNF543Q08ER8 600 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 TRIM28Q13263 835 aaKnown RBP3.21□□□□□ -1.89
CHD9-216ENST00000565803 IQCB1Q15051 598 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 FBXO47Q5MNV8 452 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 ZBTB41Q5SVQ8 909 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 DCAF15Q66K64 600 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 MAP1SQ66K74 1059 aaPredicted RBP3.21□□□□□ -1.89
CHD9-216ENST00000565803 OVOS1Q6IE37 1185 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 SLC2A7Q6PXP3 512 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 TAF8Q7Z7C8 310 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 ZNF227Q86WZ6 799 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 MICU3Q86XE3 530 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 RIOX2Q8IUF8 465 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 PTPRN2Q92932 1015 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 TNPO1Q92973 898 aaKnown RBP3.21□□□□□ -1.89
CHD9-216ENST00000565803 CYFIP2Q96F07 1278 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 SAT2Q96F10 170 aaPredicted RBP3.21□□□□□ -1.89
CHD9-216ENST00000565803 ARL5BQ96KC2 179 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 SLC9A7Q96T83 725 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 PRPF18Q99633 342 aaKnown RBP3.21□□□□□ -1.89
CHD9-216ENST00000565803 TXN2Q99757 166 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 SPXQ9BT56 116 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 TBC1D10AQ9BXI6 508 aa3.21□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms