RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 TNFRSF4P43489 277 aa17.6■□□□□ 0.41
USB1-211ENST00000565662 ARHGAP8P85298 464 aa17.6■□□□□ 0.41
USB1-211ENST00000565662 LMNB2Q03252 620 aa17.6■□□□□ 0.41
USB1-211ENST00000565662 SIM2Q14190 667 aaPredicted RBP17.6■□□□□ 0.41
USB1-211ENST00000565662 CT47A1Q5JQC4 288 aaPredicted RBP17.6■□□□□ 0.41
USB1-211ENST00000565662 C10orf120Q5SQS8 335 aa17.6■□□□□ 0.41
USB1-211ENST00000565662 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.6■□□□□ 0.41
USB1-211ENST00000565662 PPM1KQ8N3J5 372 aa17.6■□□□□ 0.41
USB1-211ENST00000565662 RPLP0P6Q8NHW5 317 aa17.6■□□□□ 0.41
USB1-211ENST00000565662 ERCC4Q92889 916 aaPredicted RBP17.6■□□□□ 0.41
USB1-211ENST00000565662 CHFRQ96EP1 664 aa17.6■□□□□ 0.41
USB1-211ENST00000565662 LRRC4Q9HBW1 653 aa17.6■□□□□ 0.41
USB1-211ENST00000565662 MARK1Q9P0L2 795 aa17.6■□□□□ 0.41
USB1-211ENST00000565662 EBF1Q9UH73 591 aa17.6■□□□□ 0.41
USB1-211ENST00000565662 TSPAN16Q9UKR8 245 aa17.6■□□□□ 0.41
USB1-211ENST00000565662 OTOGLQ3ZCN5 2332 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 A0A0A0MRY4 1105 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 CYP26A1O43174 497 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 SART1O43290 800 aaKnown RBP17.59■□□□□ 0.41
USB1-211ENST00000565662 CD19P15391 556 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 CD44P16070 742 aaKnown RBP17.59■□□□□ 0.41
USB1-211ENST00000565662 OPRD1P41143 372 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 DGKEP52429 567 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 ZXDBP98169 803 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 KCNH2Q12809 1159 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 EOGTQ5NDL2 527 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 CEP68Q76N32 757 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 RSRC2Q7L4I2 434 aaKnown RBP17.59■□□□□ 0.41
USB1-211ENST00000565662 PIGZQ86VD9 579 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 SIX6OS1Q8N1H7 587 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 GAB3Q8WWW8 586 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 KCTD13Q8WZ19 329 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 GOLGA1Q92805 767 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 ELMO3Q96BJ8 720 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 IPO9Q96P70 1041 aaKnown RBP17.59■□□□□ 0.41
USB1-211ENST00000565662 KLF16Q9BXK1 252 aaPredicted RBP17.59■□□□□ 0.41
USB1-211ENST00000565662 LINC00597Q9H2U6 94 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 CNGB3Q9NQW8 809 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 DEC1Q9P2X7 70 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 VPS13AQ96RL7 3174 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 GVINP1Q7Z2Y8 2422 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 DMDP11532 3685 aa17.59■□□□□ 0.41
USB1-211ENST00000565662 GTPBP10A4D1E9 387 aaKnown RBP17.58■□□□□ 0.4
USB1-211ENST00000565662 GADD45BO75293 160 aaPredicted RBP17.58■□□□□ 0.4
USB1-211ENST00000565662 KAT7O95251 611 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 ZBED1O96006 694 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 FNTBP49356 437 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 BYSLQ13895 437 aaKnown RBP17.58■□□□□ 0.4
USB1-211ENST00000565662 DMC1Q14565 340 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 TPD52L1Q16890 204 aaPredicted RBP17.58■□□□□ 0.4
USB1-211ENST00000565662 GOLGA7BQ2TAP0 167 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 LY6G5CQ5SRR4 150 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 PM20D1Q6GTS8 502 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 ISM2Q6H9L7 571 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 RHBDF2Q6PJF5 856 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 LCLAT1Q6UWP7 414 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 PRR23BQ6ZRT6 265 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 ERMP1Q7Z2K6 904 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 CACNA2D4Q7Z3S7 1137 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 TATDN2Q93075 761 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 PLD4Q96BZ4 506 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 ARID3AQ99856 593 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 IRX2Q9BZI1 471 aaPredicted RBP17.58■□□□□ 0.4
USB1-211ENST00000565662 ARHGEF4Q9NR80 690 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 MMP17Q9ULZ9 603 aa17.58■□□□□ 0.4
USB1-211ENST00000565662 A0A1W2PQH9 124 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 BIN1O00499 593 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 NPC1O15118 1278 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 AXIN1O15169 862 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 ZBTB24O43167 697 aaPredicted RBP17.57■□□□□ 0.4
USB1-211ENST00000565662 MED7O43513 233 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 RPP40O75818 363 aaKnown RBP17.57■□□□□ 0.4
USB1-211ENST00000565662 FBXO21O94952 628 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 LATS1O95835 1130 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 BMP6P22004 513 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 TMEM270Q6UE05 265 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 GPRIN1Q7Z2K8 1008 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 UBR7Q8N806 425 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 ZNF557Q8N988 423 aaPredicted RBP17.57■□□□□ 0.4
USB1-211ENST00000565662 TSTD1Q8NFU3 115 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 USP33Q8TEY7 942 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 IRGQQ8WZA9 623 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 HSFY1Q96LI6 401 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 SRRTQ9BXP5 876 aaKnown RBP17.57■□□□□ 0.4
USB1-211ENST00000565662 POLMQ9NP87 494 aaPredicted RBP17.57■□□□□ 0.4
USB1-211ENST00000565662 ABCC13Q9NSE7 274 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 PCDHB4Q9Y5E5 795 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 PCDHGA5Q9Y5G8 931 aa17.57■□□□□ 0.4
USB1-211ENST00000565662 GOLGA6L22H0YM25 854 aa17.56■□□□□ 0.4
USB1-211ENST00000565662 O00370 1275 aa17.56■□□□□ 0.4
USB1-211ENST00000565662 CACNG3O60359 315 aa17.56■□□□□ 0.4
USB1-211ENST00000565662 CYBBP04839 570 aa17.56■□□□□ 0.4
USB1-211ENST00000565662 ID4P47928 161 aa17.56■□□□□ 0.4
USB1-211ENST00000565662 TKTL1P51854 596 aa17.56■□□□□ 0.4
USB1-211ENST00000565662 YWHAGP61981 247 aaKnown RBP eCLIP17.56■□□□□ 0.4
USB1-211ENST00000565662 ELF2Q15723 593 aa17.56■□□□□ 0.4
USB1-211ENST00000565662 CNGA2Q16280 664 aa17.56■□□□□ 0.4
USB1-211ENST00000565662 ANO4Q32M45 955 aa17.56■□□□□ 0.4
USB1-211ENST00000565662 CLEC17AQ6ZS10 378 aa17.56■□□□□ 0.4
USB1-211ENST00000565662 BBS7Q8IWZ6 715 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms