RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 SLC7A9P82251 487 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 BNC1Q01954 994 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 TARDBPQ13148 414 aaKnown RBP eCLIP11.88□□□□□ -0.51
CAPN3-215ENST00000565559 ORC2Q13416 577 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-215ENST00000565559 GNL2Q13823 731 aaKnown RBP11.88□□□□□ -0.51
CAPN3-215ENST00000565559 TMEM132DQ14C87 1099 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 LY6G5CQ5SRR4 150 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 ARHGAP40Q5TG30 622 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 JADE1Q6IE81 842 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 SPATA2LQ8IUW3 424 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-215ENST00000565559 SCN4BQ8IWT1 228 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 NAT16Q8N8M0 369 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 ZNF248Q8NDW4 579 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 ERLEC1Q96DZ1 483 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 GABRG3Q99928 467 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 CD93Q9NPY3 652 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 SMPD4Q9NXE4 827 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 WSB2Q9NYS7 404 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-215ENST00000565559 EHD2Q9NZN4 543 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 CFAP97Q9P2B7 532 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 STARD13Q9Y3M8 1113 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 OBSL1O75147 1896 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 ATMQ13315 3056 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 E2F8A0AVK6 867 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 ANO9A1A5B4 782 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 METTL12A8MUP2 240 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 BRINP1O60477 761 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 TULP3O75386 442 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 RFPL3O75679 317 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 C1SP09871 688 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 PDIA4P13667 645 aaKnown RBP11.87□□□□□ -0.51
CAPN3-215ENST00000565559 OXTRP30559 389 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 PPP3CCP48454 512 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 CSNK1EP49674 416 aaKnown RBP11.87□□□□□ -0.51
CAPN3-215ENST00000565559 ZXDBP98169 803 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 STARD3Q14849 445 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 ENOX2Q16206 610 aaKnown RBP11.87□□□□□ -0.51
CAPN3-215ENST00000565559 KIF19Q2TAC6 998 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 TBC1D25Q3MII6 688 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 SV2CQ496J9 727 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 EGFLAMQ63HQ2 1017 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 SCFD1Q8WVM8 642 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 TSC1Q92574 1164 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 OTUB2Q96DC9 234 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 ACBD6Q9BR61 282 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 CCSER1Q9C0I3 900 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 EIF2B4Q9UI10 523 aaKnown RBP11.87□□□□□ -0.51
CAPN3-215ENST00000565559 KIAA1024Q9UPX6 916 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 DERAQ9Y315 318 aa11.87□□□□□ -0.51
CAPN3-215ENST00000565559 TSC2P49815 1807 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 KPNA7A9QM74 516 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 H0YCG3 227 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 LAD1O00515 517 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 HOXC11O43248 304 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-215ENST00000565559 MCM7P33993 719 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 LIG4P49917 911 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 MYL7Q01449 175 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 PDIA5Q14554 519 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 ANO4Q32M45 955 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 CFAP221Q4G0U5 840 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 INTS6LQ5JSJ4 861 aaKnown RBP11.86□□□□□ -0.51
CAPN3-215ENST00000565559 HES3Q5TGS1 186 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 MCTP1Q6DN14 999 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 GRAMD4Q6IC98 578 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 ERICH1Q86X53 443 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 MIB1Q86YT6 1006 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 ETFBKMTQ8IXQ9 262 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 DAW1Q8N136 415 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 SNX19Q92543 992 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 IGSF8Q969P0 613 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 FUBP3Q96I24 572 aaKnown RBP eCLIP11.86□□□□□ -0.51
CAPN3-215ENST00000565559 ZNF560Q96MR9 790 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 NTPCRQ9BSD7 190 aaKnown RBP11.86□□□□□ -0.51
CAPN3-215ENST00000565559 TIPINQ9BVW5 301 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 SLC6A17Q9H1V8 727 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 TMEM60Q9H2L4 133 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 CD248Q9HCU0 757 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 DDX19AQ9NUU7 478 aaKnown RBP11.86□□□□□ -0.51
CAPN3-215ENST00000565559 NOL7Q9UMY1 257 aaKnown RBP11.86□□□□□ -0.51
CAPN3-215ENST00000565559 SNX11Q9Y5W9 270 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 RAD54BQ9Y620 910 aa11.86□□□□□ -0.51
CAPN3-215ENST00000565559 GFRA2O00451 464 aa11.85□□□□□ -0.51
CAPN3-215ENST00000565559 ENC1O14682 589 aa11.85□□□□□ -0.51
CAPN3-215ENST00000565559 HNRNPDLO14979 420 aaKnown RBP11.85□□□□□ -0.51
CAPN3-215ENST00000565559 OGTO15294 1046 aa11.85□□□□□ -0.51
CAPN3-215ENST00000565559 DFNA5O60443 496 aa11.85□□□□□ -0.51
CAPN3-215ENST00000565559 ABL1P00519 1130 aa11.85□□□□□ -0.51
CAPN3-215ENST00000565559 ADRB2P07550 413 aa11.85□□□□□ -0.51
CAPN3-215ENST00000565559 HSP90AA1P07900 732 aaKnown RBP11.85□□□□□ -0.51
CAPN3-215ENST00000565559 MAPTP10636 758 aaKnown RBP11.85□□□□□ -0.51
CAPN3-215ENST00000565559 MBL2P11226 248 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-215ENST00000565559 SYT1P21579 422 aa11.85□□□□□ -0.51
CAPN3-215ENST00000565559 ANXA13P27216 316 aa11.85□□□□□ -0.51
CAPN3-215ENST00000565559 CLDN6P56747 220 aa11.85□□□□□ -0.51
CAPN3-215ENST00000565559 PCBP4P57723 403 aaKnown RBP11.85□□□□□ -0.51
CAPN3-215ENST00000565559 TUSC1Q2TAM9 212 aa11.85□□□□□ -0.51
CAPN3-215ENST00000565559 USP49Q70CQ1 688 aa11.85□□□□□ -0.51
CAPN3-215ENST00000565559 TMEM161BQ8NDZ6 487 aa11.85□□□□□ -0.51
CAPN3-215ENST00000565559 CEP295NLQ96MC4 621 aa11.85□□□□□ -0.51
CAPN3-215ENST00000565559 ACOX2Q99424 681 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms