RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 ZNF394Q53GI3 561 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 DCAF17Q5H9S7 520 aaPredicted RBP20.95■□□□□ 0.94
CLN6-206ENST00000565471 CBWD3Q5JTY5 395 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 CBWD5Q5RIA9 395 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 TCERG1LQ5VWI1 586 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 BTBD8Q5XKL5 378 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 RASSF3Q86WH2 238 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 PHTF2Q8N3S3 785 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 SLC4A11Q8NBS3 891 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 WBP2Q969T9 261 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 TMEM176AQ96HP8 235 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 HEXIM2Q96MH2 286 aaKnown RBP20.95■□□□□ 0.94
CLN6-206ENST00000565471 NMUR1Q9HB89 426 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.95■□□□□ 0.94
CLN6-206ENST00000565471 PCDHGA5Q9Y5G8 931 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 USP3Q9Y6I4 520 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 A0A1W2PQH9 124 aa20.94■□□□□ 0.94
CLN6-206ENST00000565471 TBX18O95935 607 aa20.94■□□□□ 0.94
CLN6-206ENST00000565471 IRF1P10914 325 aa20.94■□□□□ 0.94
CLN6-206ENST00000565471 DGKEP52429 567 aa20.94■□□□□ 0.94
CLN6-206ENST00000565471 RAD23BP54727 409 aa20.94■□□□□ 0.94
CLN6-206ENST00000565471 CRY1Q16526 586 aa20.94■□□□□ 0.94
CLN6-206ENST00000565471 PLK5Q496M5 336 aa20.94■□□□□ 0.94
CLN6-206ENST00000565471 ARHGAP17Q68EM7 881 aa20.94■□□□□ 0.94
CLN6-206ENST00000565471 TADA2BQ86TJ2 420 aa20.94■□□□□ 0.94
CLN6-206ENST00000565471 ERCC4Q92889 916 aaPredicted RBP20.94■□□□□ 0.94
CLN6-206ENST00000565471 TATDN2Q93075 761 aa20.94■□□□□ 0.94
CLN6-206ENST00000565471 CNOT6LQ96LI5 555 aaKnown RBP20.94■□□□□ 0.94
CLN6-206ENST00000565471 ARID3AQ99856 593 aa20.94■□□□□ 0.94
CLN6-206ENST00000565471 UBXN6Q9BZV1 441 aa20.94■□□□□ 0.94
CLN6-206ENST00000565471 ARMCX3Q9UH62 379 aaPredicted RBP20.94■□□□□ 0.94
CLN6-206ENST00000565471 LSM7Q9UK45 103 aaKnown RBP20.94■□□□□ 0.94
CLN6-206ENST00000565471 TRIM49BA6NDI0 452 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 ANTXRLA6NF34 631 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 PSMA7O14818 248 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 RARGP13631 454 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 PPP1R2P41236 205 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 KIR2DL1P43626 348 aaPredicted RBP20.93■□□□□ 0.94
CLN6-206ENST00000565471 KDSRQ06136 332 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 STIM1Q13586 685 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 C11orf74Q86VG3 221 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 TMEM25Q86YD3 366 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 SFTPA1Q8IWL2 248 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 CCDC33Q8N5R6 958 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 IL17RCQ8NAC3 791 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 SLC35C1Q96A29 364 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 DHTKD1Q96HY7 919 aaPredicted RBP20.93■□□□□ 0.94
CLN6-206ENST00000565471 CDK5RAP1Q96SZ6 601 aaKnown RBP20.93■□□□□ 0.94
CLN6-206ENST00000565471 ARRDC1-AS1Q9H2J1 176 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 CLIC5Q9NZA1 410 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 DEC1Q9P2X7 70 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 DNMT3LQ9UJW3 386 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 NAGPAQ9UK23 515 aa20.93■□□□□ 0.94
CLN6-206ENST00000565471 MED19A0JLT2 244 aaPredicted RBP20.92■□□□□ 0.94
CLN6-206ENST00000565471 SLC30A4O14863 429 aa20.92■□□□□ 0.94
CLN6-206ENST00000565471 TULP3O75386 442 aa20.92■□□□□ 0.94
CLN6-206ENST00000565471 ZNF806P0C7X5 589 aa20.92■□□□□ 0.94
CLN6-206ENST00000565471 RALAP11233 206 aa20.92■□□□□ 0.94
CLN6-206ENST00000565471 PLA2G4AP47712 749 aa20.92■□□□□ 0.94
CLN6-206ENST00000565471 ELF2Q15723 593 aa20.92■□□□□ 0.94
CLN6-206ENST00000565471 ANO4Q32M45 955 aa20.92■□□□□ 0.94
CLN6-206ENST00000565471 USP39Q53GS9 565 aaKnown RBP20.92■□□□□ 0.94
CLN6-206ENST00000565471 EOGTQ5NDL2 527 aa20.92■□□□□ 0.94
CLN6-206ENST00000565471 NUDT18Q6ZVK8 323 aa20.92■□□□□ 0.94
CLN6-206ENST00000565471 SCD5Q86SK9 330 aa20.92■□□□□ 0.94
CLN6-206ENST00000565471 ALLCQ8N6M5 410 aa20.92■□□□□ 0.94
CLN6-206ENST00000565471 TXNDC5Q8NBS9 432 aaKnown RBP20.92■□□□□ 0.94
CLN6-206ENST00000565471 KCNV2Q8TDN2 545 aa20.92■□□□□ 0.94
CLN6-206ENST00000565471 DUSP15Q9H1R2 295 aaPredicted RBP20.92■□□□□ 0.94
CLN6-206ENST00000565471 METTL14Q9HCE5 456 aaKnown RBP20.92■□□□□ 0.94
CLN6-206ENST00000565471 MARK1Q9P0L2 795 aa20.92■□□□□ 0.94
CLN6-206ENST00000565471 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.91■□□□□ 0.94
CLN6-206ENST00000565471 RHOBTB1O94844 696 aa20.91■□□□□ 0.94
CLN6-206ENST00000565471 KLF8O95600 359 aaPredicted RBP20.91■□□□□ 0.94
CLN6-206ENST00000565471 TIE1P35590 1138 aa20.91■□□□□ 0.94
CLN6-206ENST00000565471 SLC8A3P57103 927 aa20.91■□□□□ 0.94
CLN6-206ENST00000565471 YWHAEP62258 255 aaKnown RBP20.91■□□□□ 0.94
CLN6-206ENST00000565471 CUL2Q13617 745 aa20.91■□□□□ 0.94
CLN6-206ENST00000565471 RAB41Q5JT25 222 aa20.91■□□□□ 0.94
CLN6-206ENST00000565471 C10orf120Q5SQS8 335 aa20.91■□□□□ 0.94
CLN6-206ENST00000565471 ANO7Q6IWH7 933 aa20.91■□□□□ 0.94
CLN6-206ENST00000565471 NAT16Q8N8M0 369 aa20.91■□□□□ 0.94
CLN6-206ENST00000565471 TERB1Q8NA31 727 aa20.91■□□□□ 0.94
CLN6-206ENST00000565471 ANKRD52Q8NB46 1076 aa20.91■□□□□ 0.94
CLN6-206ENST00000565471 MDGA1Q8NFP4 955 aa20.91■□□□□ 0.94
CLN6-206ENST00000565471 CEP63Q96MT8 703 aa20.91■□□□□ 0.94
CLN6-206ENST00000565471 WDR35Q9P2L0 1181 aa20.91■□□□□ 0.94
CLN6-206ENST00000565471 MAN1B1Q9UKM7 699 aa20.91■□□□□ 0.94
CLN6-206ENST00000565471 TBC1D3BA6NDS4 549 aa20.9■□□□□ 0.94
CLN6-206ENST00000565471 SGK1O00141 431 aa20.9■□□□□ 0.94
CLN6-206ENST00000565471 MDM4O15151 490 aa20.9■□□□□ 0.94
CLN6-206ENST00000565471 CACNG3O60359 315 aa20.9■□□□□ 0.94
CLN6-206ENST00000565471 ALDH1A2O94788 518 aa20.9■□□□□ 0.94
CLN6-206ENST00000565471 PLA2G2CQ5R387 149 aa20.9■□□□□ 0.94
CLN6-206ENST00000565471 EMC10Q5UCC4 262 aa20.9■□□□□ 0.94
CLN6-206ENST00000565471 FOXR2Q6PJQ5 311 aa20.9■□□□□ 0.94
CLN6-206ENST00000565471 TMEM92Q6UXU6 159 aa20.9■□□□□ 0.94
CLN6-206ENST00000565471 Q6ZNB5 142 aa20.9■□□□□ 0.94
CLN6-206ENST00000565471 TRMT11Q7Z4G4 463 aaKnown RBP20.9■□□□□ 0.94
CLN6-206ENST00000565471 PIGZQ86VD9 579 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms