RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 PCDHGA5Q9Y5G8 931 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 PCDHA5Q9Y5H7 936 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 CITO14578 2027 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 ZDBF2Q9HCK1 2354 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 DOCK8Q8NF50 2099 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 TRIP11Q15643 1979 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 TCRBV21S2A2A0A5A6 115 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 BCLAF3A2AJT9 711 aaKnown RBP6.75□□□□□ -1.33
TCF4-228ENST00000565393 HHLA1C9JL84 531 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 KHNYNO15037 678 aaKnown RBP6.75□□□□□ -1.33
TCF4-228ENST00000565393 MDM4O15151 490 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 TRIM24O15164 1050 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 TULP3O75386 442 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 EPN2O95208 641 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 TYRP14679 529 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 CD19P15391 556 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 MPLP40238 635 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 KIR2DL1P43626 348 aaPredicted RBP6.75□□□□□ -1.33
TCF4-228ENST00000565393 PSEN1P49768 467 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 MXI1P50539 228 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 RAD23BP54727 409 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 COG7P83436 770 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 ENPEPQ07075 957 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 INCA1Q0VD86 236 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 MESP2Q0VG99 397 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 STIM1Q13586 685 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 HSF5Q4G112 596 aaPredicted RBP6.75□□□□□ -1.33
TCF4-228ENST00000565393 STPG1Q5TH74 334 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 RNF43Q68DV7 783 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 GRAMD4Q6IC98 578 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 LPCAT2Q7L5N7 544 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 GPRIN1Q7Z2K8 1008 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 TRMT11Q7Z4G4 463 aaKnown RBP6.75□□□□□ -1.33
TCF4-228ENST00000565393 SCD5Q86SK9 330 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 C11orf74Q86VG3 221 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 CREBRFQ8IUR6 639 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 ARHGAP18Q8N392 663 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 DEFB119Q8N690 84 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 ZNF513Q8N8E2 541 aaPredicted RBP6.75□□□□□ -1.33
TCF4-228ENST00000565393 ANKRD52Q8NB46 1076 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 UBA3Q8TBC4 463 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 DDX1Q92499 740 aaKnown RBP6.75□□□□□ -1.33
TCF4-228ENST00000565393 PIGKQ92643 395 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 BHMTQ93088 406 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 ERLEC1Q96DZ1 483 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 FAXDC2Q96IV6 333 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 ZFRQ96KR1 1074 aaKnown RBP6.75□□□□□ -1.33
TCF4-228ENST00000565393 CNOT6LQ96LI5 555 aaKnown RBP6.75□□□□□ -1.33
TCF4-228ENST00000565393 CDK5RAP1Q96SZ6 601 aaKnown RBP6.75□□□□□ -1.33
TCF4-228ENST00000565393 GTPBP4Q9BZE4 634 aaKnown RBP6.75□□□□□ -1.33
TCF4-228ENST00000565393 UBXN6Q9BZV1 441 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 NMUR1Q9HB89 426 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 CYLDQ9NQC7 956 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 RXFP3Q9NSD7 469 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.75□□□□□ -1.33
TCF4-228ENST00000565393 HESX1Q9UBX0 185 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 ARMCX3Q9UH62 379 aaPredicted RBP6.75□□□□□ -1.33
TCF4-228ENST00000565393 RASAL2Q9UJF2 1139 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 STRIP2Q9ULQ0 834 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 DOCK6Q96HP0 2047 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 MYH11P35749 1972 aa6.75□□□□□ -1.33
TCF4-228ENST00000565393 ZFHX2Q9C0A1 2572 aaPredicted RBP6.74□□□□□ -1.33
TCF4-228ENST00000565393 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 SLC12A8A0AV02 714 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 C4orf47A7E2U8 309 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 HOXC11O43248 304 aaPredicted RBP6.74□□□□□ -1.33
TCF4-228ENST00000565393 ZBED1O96006 694 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 CYBBP04839 570 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 NTSR1P30989 418 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 CHKAP35790 457 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 DGKGP49619 791 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 TKTL1P51854 596 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 KIF11P52732 1056 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 PMS1P54277 932 aaKnown RBP6.74□□□□□ -1.33
TCF4-228ENST00000565393 YWHAGP61981 247 aaKnown RBP eCLIP6.74□□□□□ -1.33
TCF4-228ENST00000565393 YWHAEP62258 255 aaKnown RBP6.74□□□□□ -1.33
TCF4-228ENST00000565393 CETN1Q12798 172 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 EFEMP1Q12805 493 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 CCDC40Q4G0X9 1142 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 CBWD6Q4V339 395 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 ZCWPW2Q504Y3 356 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 SGO2Q562F6 1265 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 CBWD3Q5JTY5 395 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 PLA2G2CQ5R387 149 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 CBWD5Q5RIA9 395 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 TCEAL6Q6IPX3 200 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 KLHL10Q6JEL2 608 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 ARMCX6Q7L4S7 300 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 CCDC186Q7Z3E2 898 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 PIGZQ86VD9 579 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 RASSF3Q86WH2 238 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 TMEFF1Q8IYR6 380 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 CHPFQ8IZ52 775 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 FRMD1Q8N878 549 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 SLC4A11Q8NBS3 891 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 ENGASEQ8NFI3 743 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 MDGA1Q8NFP4 955 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 KCNV2Q8TDN2 545 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 RNF139Q8WU17 664 aa6.74□□□□□ -1.33
TCF4-228ENST00000565393 NDRG1Q92597 394 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms