RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PCDHA10Q9Y5I2 948 aa21.27■□□□□ 0.99
MAP1LC3B-206ENST00000564844 TEX264Q9Y6I9 313 aa21.27■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PFDN1O60925 122 aa21.26■□□□□ 0.99
MAP1LC3B-206ENST00000564844 RFPL1O75677 317 aa21.26■□□□□ 0.99
MAP1LC3B-206ENST00000564844 MIPP30301 263 aa21.26■□□□□ 0.99
MAP1LC3B-206ENST00000564844 CCNIQ14094 377 aa21.26■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PODNQ7Z5L7 613 aa21.26■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PGBD4Q96DM1 585 aa21.26■□□□□ 0.99
MAP1LC3B-206ENST00000564844 GRIP2Q9C0E4 1043 aa21.26■□□□□ 0.99
MAP1LC3B-206ENST00000564844 XAB2Q9HCS7 855 aaKnown RBP21.26■□□□□ 0.99
MAP1LC3B-206ENST00000564844 STK32BQ9NY57 414 aa21.26■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ZC3H11AO75152 810 aaKnown RBP eCLIP21.26■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ROR1Q01973 937 aa21.26■□□□□ 0.99
MAP1LC3B-206ENST00000564844 HACE1Q8IYU2 909 aa21.26■□□□□ 0.99
MAP1LC3B-206ENST00000564844 KLHL4Q9C0H6 718 aa21.26■□□□□ 0.99
MAP1LC3B-206ENST00000564844 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.26■□□□□ 0.99
MAP1LC3B-206ENST00000564844 POLIQ9UNA4 740 aa21.26■□□□□ 0.99
MAP1LC3B-206ENST00000564844 NELFEP18615 380 aaKnown RBP21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 SLC25A11Q02978 314 aaKnown RBP21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 VPS72Q15906 364 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 C15orf59Q2T9L4 293 aaPredicted RBP21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 DNAL1Q4LDG9 190 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ATG14Q6ZNE5 492 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 GALNT4Q8N4A0 578 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 CNBD2Q96M20 576 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 HEMK1Q9Y5R4 338 aaPredicted RBP21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 COL24A1Q17RW2 1714 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 E7ESA3 106 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PEX10O60683 326 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 DGKIO75912 1065 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 CPOXP36551 454 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 HSD17B4P51659 736 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PRKCEQ02156 737 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 FASTKD1Q53R41 847 aaKnown RBP21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PHTF2Q8N3S3 785 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ZNF778Q96MU6 729 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 DDX56Q9NY93 547 aaKnown RBP21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 TTLL3Q9Y4R7 772 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 GREB1LQ9C091 1923 aaPredicted RBP21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 SPDYE16A6NNV3 312 aaPredicted RBP21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 CSDE1O75534 798 aaKnown RBP21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 GARTP22102 1010 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 RBL1P28749 1068 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 YWHAZP63104 245 aaKnown RBP21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 FOLH1Q04609 750 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 LSAMPQ13449 338 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ACAP1Q15027 740 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 HADHQ16836 314 aaKnown RBP21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 BBS12Q6ZW61 710 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 DEPTORQ8TB45 409 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 WNK4Q96J92 1243 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 CPXM1Q96SM3 734 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PPCSQ9HAB8 311 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ZNF358Q9NW07 568 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 INPP5FQ9Y2H2 1132 aa21.25■□□□□ 0.99
MAP1LC3B-206ENST00000564844 DCXO43602 365 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 UQCRBP14927 111 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 SNRPFP62306 86 aaKnown RBP21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 SLC27A3Q5K4L6 730 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 CEP70Q8NHQ1 597 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 SIPA1L1O43166 1804 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 CNTNAP2Q9UHC6 1331 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 SPDYE2BA6NHP3 402 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 E9PBE3 544 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ADCY3O60266 1144 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 KLHL41O60662 606 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 SPDYE6P0CI01 402 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ADORA2AP29274 412 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 SPDYE2Q495Y8 402 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ACAD11Q709F0 780 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 SAMD3Q8N6K7 520 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 MAGEB5Q9BZ81 275 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PICK1Q9NRD5 415 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 APOBEC2Q9Y235 224 aaKnown RBP21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 CEP350Q5VT06 3117 aa21.24■□□□□ 0.99
MAP1LC3B-206ENST00000564844 CFLARO15519 480 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ICAM1P05362 532 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ABCG1P45844 678 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 BAATQ14032 418 aaPredicted RBP21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PPM1JQ5JR12 505 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 STRIP1Q5VSL9 837 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 STKLD1Q8NE28 680 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 UBA3Q8TBC4 463 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ADAM32Q8TC27 787 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 OXCT2Q9BYC2 517 aaPredicted RBP21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ANKEF1Q9NU02 776 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ADGRF2Q8IZF7 708 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ARHGAP18Q8N392 663 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PDCD2LQ9BRP1 358 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 RNPEPQ9H4A4 650 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 CYP26B1Q9NR63 512 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 RIPK3Q9Y572 518 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 C15orf38-AP3S2A0A0A6YYH1 394 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 GOLGA8QA0A0J9YX86 632 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 GOLGA8OA6NCC3 632 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 GOLGA8NF8WBI6 632 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 NPR1P16066 1061 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PMLP29590 882 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 COPAP53621 1224 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms