RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 IVNS1ABPQ9Y6Y0 642 aa16.9■□□□□ 0.3
LINC00554-201ENST00000564841 UGT1A9O60656 530 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 SERPINB8P50452 374 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 HAUS6Q7Z4H7 955 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 ATP11CQ8NB49 1132 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 APOPT1Q96IL0 206 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 DHRS4Q9BTZ2 278 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 UGT1A7Q9HAW7 530 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 UGT1A10Q9HAW8 530 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 UGT1A8Q9HAW9 530 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 TUFT1Q9NNX1 390 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 KCNK4Q9NYG8 393 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 DNAJB4Q9UDY4 337 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 POMPQ9Y244 141 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 ZNFX1Q9P2E3 1918 aaKnown RBP16.89■□□□□ 0.29
LINC00554-201ENST00000564841 H3BNX3 289 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 KRT1P04264 644 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 PIM1P11309 404 aaPredicted RBP16.89■□□□□ 0.29
LINC00554-201ENST00000564841 VCPP55072 806 aaKnown RBP16.89■□□□□ 0.29
LINC00554-201ENST00000564841 BTG3Q14201 252 aaPredicted RBP16.89■□□□□ 0.29
LINC00554-201ENST00000564841 NFIL3Q16649 462 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 SCARA3Q6AZY7 606 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 CTAGE3PQ8IX95 158 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 DCUN1D1Q96GG9 259 aa16.89■□□□□ 0.29
LINC00554-201ENST00000564841 TRIM56Q9BRZ2 755 aaKnown RBP16.89■□□□□ 0.29
LINC00554-201ENST00000564841 SSU72Q9NP77 194 aaKnown RBP16.89■□□□□ 0.29
LINC00554-201ENST00000564841 TRIM49D1C9J1S8 452 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 I3L4J1 428 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 ADCY3O60266 1144 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 ALDH1A3P47895 512 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 NAA20P61599 178 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 SPOPLQ6IQ16 392 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 SH2D5Q6ZV89 423 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 POLNQ7Z5Q5 900 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 MCF2L2Q86YR7 1114 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 DEFB107AQ8IZN7 70 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 DIS3LQ8TF46 1054 aaKnown RBP16.88■□□□□ 0.29
LINC00554-201ENST00000564841 E2F7Q96AV8 911 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 ZNF512Q96ME7 567 aaPredicted RBP16.88■□□□□ 0.29
LINC00554-201ENST00000564841 MAF1Q9H063 256 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 IQCGQ9H095 443 aaKnown RBP16.88■□□□□ 0.29
LINC00554-201ENST00000564841 HEY1Q9Y5J3 304 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 MYPNQ86TC9 1320 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 PSME4Q14997 1843 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 COPEO14579 308 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 TLR3O15455 904 aaKnown RBP16.88■□□□□ 0.29
LINC00554-201ENST00000564841 ENTPD1P49961 510 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 EEPD1Q7L9B9 569 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 CHSY1Q86X52 802 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 SENP7Q9BQF6 1050 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 EPB41L1Q9H4G0 881 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 SYNPO2Q9UMS6 1093 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 F8VP50 259 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 TMX2-CTNND1H3BSU7 103 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 CRTAMO95727 393 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 SRGAP2CP0DJJ0 459 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 SRGAP2BP0DMP2 458 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 HSD17B4P51659 736 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 CYTH1Q15438 398 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 XKR9Q5GH70 373 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 VWA5B1Q5TIE3 1220 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 KYAT3Q6YP21 454 aaKnown RBP16.88■□□□□ 0.29
LINC00554-201ENST00000564841 ZBTB46Q86UZ6 589 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 XXYLT1Q8NBI6 393 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 FNDC8Q8TC99 324 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 PPP4R1Q8TF05 950 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 PCDH18Q9HCL0 1135 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 CDH22Q9UJ99 828 aa16.88■□□□□ 0.29
LINC00554-201ENST00000564841 TCRBV9S1A1TA0A576 114 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 RBP3P10745 1247 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 ELK3P41970 407 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 NSFP46459 744 aaKnown RBP16.87■□□□□ 0.29
LINC00554-201ENST00000564841 LPIN1Q14693 890 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 PGM5Q15124 567 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 SEZ6Q53EL9 994 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 WDR78Q5VTH9 848 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 AAGABQ6PD74 315 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 DNAJC14Q6Y2X3 702 aaPredicted RBP16.87■□□□□ 0.29
LINC00554-201ENST00000564841 SLITRK1Q96PX8 696 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 OXCT2Q9BYC2 517 aaPredicted RBP16.87■□□□□ 0.29
LINC00554-201ENST00000564841 FOXP3Q9BZS1 431 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 FAF1Q9UNN5 650 aaPredicted RBP16.87■□□□□ 0.29
LINC00554-201ENST00000564841 MAD1L1Q9Y6D9 718 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 IKBKGQ9Y6K9 419 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 CXorf49A8MYA2 514 aaPredicted RBP16.87■□□□□ 0.29
LINC00554-201ENST00000564841 PHBP35232 272 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 YWHAGP61981 247 aaKnown RBP eCLIP16.87■□□□□ 0.29
LINC00554-201ENST00000564841 PSMC5P62195 406 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 MRPS5P82675 430 aaKnown RBP16.87■□□□□ 0.29
LINC00554-201ENST00000564841 CDKL1Q00532 357 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 MAMLD1Q13495 774 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 CNGA3Q16281 694 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 KATNAL2Q8IYT4 538 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 PPM1NQ8N819 430 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 WWP1Q9H0M0 922 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 NDUFA13Q9P0J0 144 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 AP4B1Q9Y6B7 739 aa16.87■□□□□ 0.29
LINC00554-201ENST00000564841 ITM2AO43736 263 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 INHBAP08476 426 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 MLH1P40692 756 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms