RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 SGK1O00141 431 aa19.53■□□□□ 0.72
CLN6-204ENST00000564752 KLF8O95600 359 aaPredicted RBP19.53■□□□□ 0.72
CLN6-204ENST00000564752 STIM1Q13586 685 aa19.53■□□□□ 0.72
CLN6-204ENST00000564752 TCEAL6Q6IPX3 200 aa19.53■□□□□ 0.72
CLN6-204ENST00000564752 BBS7Q8IWZ6 715 aa19.53■□□□□ 0.72
CLN6-204ENST00000564752 ETFBKMTQ8IXQ9 262 aa19.53■□□□□ 0.72
CLN6-204ENST00000564752 OLIG1Q8TAK6 271 aa19.53■□□□□ 0.72
CLN6-204ENST00000564752 TCEAL3Q969E4 200 aa19.53■□□□□ 0.72
CLN6-204ENST00000564752 WBP2Q969T9 261 aa19.53■□□□□ 0.72
CLN6-204ENST00000564752 FAM49BQ9NUQ9 324 aa19.53■□□□□ 0.72
CLN6-204ENST00000564752 EML5Q05BV3 1969 aa19.53■□□□□ 0.72
CLN6-204ENST00000564752 MYH10P35580 1976 aa19.52■□□□□ 0.72
CLN6-204ENST00000564752 HOXC11O43248 304 aaPredicted RBP19.52■□□□□ 0.72
CLN6-204ENST00000564752 STX10O60499 249 aa19.52■□□□□ 0.72
CLN6-204ENST00000564752 TLR5O60602 858 aa19.52■□□□□ 0.72
CLN6-204ENST00000564752 ALDH1A2O94788 518 aa19.52■□□□□ 0.72
CLN6-204ENST00000564752 TRIM21P19474 475 aaKnown RBP19.52■□□□□ 0.72
CLN6-204ENST00000564752 GTF2H1P32780 548 aa19.52■□□□□ 0.72
CLN6-204ENST00000564752 MXI1P50539 228 aa19.52■□□□□ 0.72
CLN6-204ENST00000564752 KDSRQ06136 332 aa19.52■□□□□ 0.72
CLN6-204ENST00000564752 INCA1Q0VD86 236 aa19.52■□□□□ 0.72
CLN6-204ENST00000564752 ST3GAL2Q16842 350 aa19.52■□□□□ 0.72
CLN6-204ENST00000564752 KRT39Q6A163 491 aa19.52■□□□□ 0.72
CLN6-204ENST00000564752 HTR3DQ70Z44 454 aa19.52■□□□□ 0.72
CLN6-204ENST00000564752 TMEM25Q86YD3 366 aa19.52■□□□□ 0.72
CLN6-204ENST00000564752 ELOA2Q8IYF1 753 aaPredicted RBP19.52■□□□□ 0.72
CLN6-204ENST00000564752 NAT16Q8N8M0 369 aa19.52■□□□□ 0.72
CLN6-204ENST00000564752 TWNKQ96RR1 684 aa19.52■□□□□ 0.72
CLN6-204ENST00000564752 HNRNPABQ99729 332 aaKnown RBP19.52■□□□□ 0.72
CLN6-204ENST00000564752 NIF3L1Q9GZT8 377 aa19.52■□□□□ 0.72
CLN6-204ENST00000564752 NACA2Q9H009 215 aa19.52■□□□□ 0.72
CLN6-204ENST00000564752 APOBEC3GQ9HC16 384 aaKnown RBP19.52■□□□□ 0.72
CLN6-204ENST00000564752 TLR8Q9NR97 1041 aaKnown RBP19.52■□□□□ 0.72
CLN6-204ENST00000564752 SPHK2Q9NRA0 654 aa19.52■□□□□ 0.72
CLN6-204ENST00000564752 TBC1D3BA6NDS4 549 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 HHLA1C9JL84 531 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 PSMA7O14818 248 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 SLC16A3O15427 465 aaKnown RBP19.51■□□□□ 0.71
CLN6-204ENST00000564752 GREM1O60565 184 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 ADAM23O75077 832 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 GADD45BO75293 160 aaPredicted RBP19.51■□□□□ 0.71
CLN6-204ENST00000564752 TBX18O95935 607 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 FAM200BP0CF97 657 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 BCKDHBP21953 392 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 ADORA2BP29275 332 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 FKBP3Q00688 224 aaKnown RBP19.51■□□□□ 0.71
CLN6-204ENST00000564752 LRRC63Q05C16 580 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 DCAF17Q5H9S7 520 aaPredicted RBP19.51■□□□□ 0.71
CLN6-204ENST00000564752 EOGTQ5NDL2 527 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 BTBD8Q5XKL5 378 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 RNF43Q68DV7 783 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 ANKRD40Q6AI12 368 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 CLEC20AQ6ZU45 233 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 TTC30AQ86WT1 665 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 KCNV2Q8TDN2 545 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 LSM14BQ9BX40 385 aaKnown RBP19.51■□□□□ 0.71
CLN6-204ENST00000564752 KLF16Q9BXK1 252 aaPredicted RBP19.51■□□□□ 0.71
CLN6-204ENST00000564752 CYP3A43Q9HB55 503 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 POLMQ9NP87 494 aaPredicted RBP19.51■□□□□ 0.71
CLN6-204ENST00000564752 MAN1B1Q9UKM7 699 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 SCML2Q9UQR0 700 aa19.51■□□□□ 0.71
CLN6-204ENST00000564752 MAP1BP46821 2468 aaKnown RBP19.51■□□□□ 0.71
CLN6-204ENST00000564752 TRIM49BA6NDI0 452 aa19.5■□□□□ 0.71
CLN6-204ENST00000564752 TULP3O75386 442 aa19.5■□□□□ 0.71
CLN6-204ENST00000564752 IRF1P10914 325 aa19.5■□□□□ 0.71
CLN6-204ENST00000564752 PPP1R2P41236 205 aa19.5■□□□□ 0.71
CLN6-204ENST00000564752 PMS1P54277 932 aaKnown RBP19.5■□□□□ 0.71
CLN6-204ENST00000564752 MCCD1P59942 119 aaPredicted RBP19.5■□□□□ 0.71
CLN6-204ENST00000564752 ANO4Q32M45 955 aa19.5■□□□□ 0.71
CLN6-204ENST00000564752 PREPLQ4J6C6 727 aaPredicted RBP19.5■□□□□ 0.71
CLN6-204ENST00000564752 N4BP2L1Q5TBK1 243 aaPredicted RBP19.5■□□□□ 0.71
CLN6-204ENST00000564752 TCERG1LQ5VWI1 586 aa19.5■□□□□ 0.71
CLN6-204ENST00000564752 ISM2Q6H9L7 571 aa19.5■□□□□ 0.71
CLN6-204ENST00000564752 GPRIN1Q7Z2K8 1008 aa19.5■□□□□ 0.71
CLN6-204ENST00000564752 ABCA7Q8IZY2 2146 aa19.5■□□□□ 0.71
CLN6-204ENST00000564752 WHAMMQ8TF30 809 aa19.5■□□□□ 0.71
CLN6-204ENST00000564752 CYFIP2Q96F07 1278 aa19.5■□□□□ 0.71
CLN6-204ENST00000564752 NT5C1AQ9BXI3 368 aa19.5■□□□□ 0.71
CLN6-204ENST00000564752 ZDHHC4Q9NPG8 344 aa19.5■□□□□ 0.71
CLN6-204ENST00000564752 CYLDQ9NQC7 956 aa19.5■□□□□ 0.71
CLN6-204ENST00000564752 OSER1Q9NX31 292 aa19.5■□□□□ 0.71
CLN6-204ENST00000564752 DEC1Q9P2X7 70 aa19.5■□□□□ 0.71
CLN6-204ENST00000564752 MYO16Q9Y6X6 1858 aa19.5■□□□□ 0.71
CLN6-204ENST00000564752 CHD8Q9HCK8 2581 aa19.49■□□□□ 0.71
CLN6-204ENST00000564752 KIAA1549LQ6ZVL6 1849 aa19.49■□□□□ 0.71
CLN6-204ENST00000564752 ATP5C1P36542 298 aaKnown RBP19.49■□□□□ 0.71
CLN6-204ENST00000564752 P2RY2P41231 377 aa19.49■□□□□ 0.71
CLN6-204ENST00000564752 ZC3H3Q8IXZ2 948 aaKnown RBP19.49■□□□□ 0.71
CLN6-204ENST00000564752 FBXL13Q8NEE6 735 aa19.49■□□□□ 0.71
CLN6-204ENST00000564752 RLN3Q8WXF3 142 aa19.49■□□□□ 0.71
CLN6-204ENST00000564752 EDEM2Q9BV94 578 aa19.49■□□□□ 0.71
CLN6-204ENST00000564752 PNPLA8Q9NP80 782 aa19.49■□□□□ 0.71
CLN6-204ENST00000564752 CHMP5Q9NZZ3 219 aa19.49■□□□□ 0.71
CLN6-204ENST00000564752 MYOFQ9NZM1 2061 aa19.48■□□□□ 0.71
CLN6-204ENST00000564752 CYP26A1O43174 497 aa19.48■□□□□ 0.71
CLN6-204ENST00000564752 CILPO75339 1184 aa19.48■□□□□ 0.71
CLN6-204ENST00000564752 KCNK5O95279 499 aa19.48■□□□□ 0.71
CLN6-204ENST00000564752 CD58P19256 250 aa19.48■□□□□ 0.71
CLN6-204ENST00000564752 ACO1P21399 889 aaKnown RBP19.48■□□□□ 0.71
CLN6-204ENST00000564752 KLHDC10Q6PID8 442 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms