RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 PDHA1P08559 390 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 SNRPAP09012 282 aaKnown RBP16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 LINGO3P0C6S8 592 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 VDRP11473 427 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 CPA2P48052 419 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 RGS7P49802 495 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 MRPS5P82675 430 aaKnown RBP16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 HSF5Q4G112 596 aaPredicted RBP16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 LMNTD2Q8IXW0 634 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 PQLC3Q8N755 202 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 TRPM4Q8TD43 1214 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 WDR60Q8WVS4 1066 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 MCUR1Q96AQ8 359 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 PLLPQ9Y342 182 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 PPME1Q9Y570 386 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 ENO4A6NNW6 628 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 LGR5O75473 907 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 KRT37O76014 449 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 LMNAP02545 664 aaKnown RBP16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 RXRBP28702 533 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 NDST1P52848 882 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 BCAR1P56945 870 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 RCN1Q15293 331 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 CA9Q16790 459 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 CCDC14Q49A88 953 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 DLK2Q6UY11 383 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 CCDC110Q8TBZ0 833 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 DNAJC9Q8WXX5 260 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 COPS5Q92905 334 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 HPDLQ96IR7 371 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 SPATC1LQ9H0A9 340 aa16.08■□□□□ 0.16
GTF3C1-205ENST00000564747 EVPLQ92817 2033 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 RFPL1O75677 317 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 OSBPP22059 807 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 BST1Q10588 318 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 KRT72Q14CN4 511 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 CCDC6Q16204 474 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 SH3D19Q5HYK7 790 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 CELF3Q5SZQ8 465 aaKnown RBP16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 CCDC62Q6P9F0 684 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 PCDH19Q8TAB3 1148 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 CPB2Q96IY4 423 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 SPATA33Q96N06 139 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 NGRNQ9NPE2 291 aaKnown RBP16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 ETNK2Q9NVF9 386 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 TSPAN16Q9UKR8 245 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 CCDC195A0A1B0GUA6 201 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 SOCS7O14512 581 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 KLF11O14901 512 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 ZBED1O96006 694 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 PFKMP08237 780 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 IGBP1P78318 339 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 PLPPR4Q7Z2D5 763 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 APOBEC3FQ8IUX4 373 aaKnown RBP16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 MAP7D3Q8IWC1 876 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 NRG4Q8WWG1 115 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 IFT122Q9HBG6 1241 aa16.07■□□□□ 0.16
GTF3C1-205ENST00000564747 SLC15A5A6NIM6 579 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 KITP10721 976 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 RARBP10826 455 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 TMPRSS15P98073 1019 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 MUM1Q2TAK8 710 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 RFX8Q6ZV50 586 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 CCDC33Q8N5R6 958 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 FBXO27Q8NI29 283 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 DTX3LQ8TDB6 740 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 PCDH18Q9HCL0 1135 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 ARHGEF4Q9NR80 690 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 NMRK1Q9NWW6 199 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 GGA3Q9NZ52 723 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 STOML1Q9UBI4 398 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 BARX2Q9UMQ3 279 aaPredicted RBP16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 APOL1O14791 398 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 IL1BP01584 269 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 CSH1P0DML2 217 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 CSH2P0DML3 217 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 PRKCHP24723 683 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 MRPS35P82673 323 aaKnown RBP16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 TSNAXIP1Q2TAA8 658 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 SLC10A6Q3KNW5 377 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 PPP6R3Q5H9R7 873 aaPredicted RBP16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 SNX30Q5VWJ9 437 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 TRMT10BQ6PF06 316 aaKnown RBP16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 UNC5AQ6ZN44 842 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 TREML1Q86YW5 311 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 ARID3BQ8IVW6 561 aaPredicted RBP16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 EXOC8Q8IYI6 725 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 E2F7Q96AV8 911 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 RTP4Q96DX8 246 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 KLC2Q9H0B6 622 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 CYP3A43Q9HB55 503 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 MARCOQ9UEW3 520 aaPredicted RBP16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 LOC285556D6RIA3 1793 aa16.06■□□□□ 0.16
GTF3C1-205ENST00000564747 I3L4J1 428 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 CAPN9O14815 690 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 NVLO15381 856 aaKnown RBP16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 TOP3BO95985 862 aaKnown RBP16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 CHI3L2Q15782 390 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms