RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 LTV1Q96GA3 475 aaPredicted RBP5.94□□□□□ -1.46
CHD9-210ENST00000564582 PAGE5Q96GU1 130 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 CAPZA3Q96KX2 299 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 GBP5Q96PP8 586 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 UBAC1Q9BSL1 405 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 PITHD1Q9GZP4 211 aaPredicted RBP5.94□□□□□ -1.46
CHD9-210ENST00000564582 PPCSQ9HAB8 311 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 RNPEPL1Q9HAU8 725 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 EPB41L5Q9HCM4 733 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 INTS9Q9NV88 658 aaKnown RBP5.94□□□□□ -1.46
CHD9-210ENST00000564582 DNAJB4Q9UDY4 337 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 MTRF1LQ9UGC7 380 aaKnown RBP5.94□□□□□ -1.46
CHD9-210ENST00000564582 INTUQ9ULD6 942 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 TTC7AQ9ULT0 858 aaPredicted RBP5.94□□□□□ -1.46
CHD9-210ENST00000564582 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.94□□□□□ -1.46
CHD9-210ENST00000564582 PCDHA13Q9Y5I0 950 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 USH1CQ9Y6N9 552 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 LRRC37A3O60309 1634 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 ALKQ9UM73 1620 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 MROH7Q68CQ1 1323 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 RGPD1P0DJD0 1748 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 MON2Q7Z3U7 1717 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 A0A0A6YYJ9 748 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 SMIM31A0A1B0GVY4 71 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 PODXLO00592 558 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 DAPK3O43293 454 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 OPHN1O60890 802 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 CIAO1O76071 339 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 ZWINTO95229 277 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 GNA14O95837 355 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 KRT14P02533 472 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 ATP5BP06576 529 aaKnown RBP5.93□□□□□ -1.46
CHD9-210ENST00000564582 PARP1P09874 1014 aaKnown RBP5.93□□□□□ -1.46
CHD9-210ENST00000564582 CALM1P0DP23 149 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 CALM2P0DP24 149 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 CALM3P0DP25 149 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 TROVE2P10155 538 aaKnown RBP eCLIP5.93□□□□□ -1.46
CHD9-210ENST00000564582 MYBP10242 640 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 VHLP40337 213 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 XIAPP98170 497 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 GUCY1B3Q02153 619 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 GUCY2DQ02846 1103 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 ORC2Q13416 577 aaPredicted RBP5.93□□□□□ -1.46
CHD9-210ENST00000564582 DHX34Q14147 1143 aaKnown RBP5.93□□□□□ -1.46
CHD9-210ENST00000564582 HLTFQ14527 1009 aaKnown RBP eCLIP5.93□□□□□ -1.46
CHD9-210ENST00000564582 ADRM1Q16186 407 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 MAN2A1Q16706 1144 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 RABL6Q3YEC7 729 aaPredicted RBP5.93□□□□□ -1.46
CHD9-210ENST00000564582 GALNTL6Q49A17 601 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 SLC9C1Q4G0N8 1177 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 CCDC92Q53HC0 331 aaPredicted RBP5.93□□□□□ -1.46
CHD9-210ENST00000564582 IQSEC1Q6DN90 963 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 PPP1R21Q6ZMI0 780 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 VPS36Q86VN1 386 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 CROCCP3Q8IVE0 287 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 MB21D2Q8IYB1 491 aaPredicted RBP5.93□□□□□ -1.46
CHD9-210ENST00000564582 CDYL2Q8N8U2 506 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 ZNF398Q8TD17 642 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 PIGOQ8TEQ8 1089 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 PARD3BQ8TEW8 1205 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 ATP8B4Q8TF62 1192 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 SNRNP27Q8WVK2 155 aaKnown RBP5.93□□□□□ -1.46
CHD9-210ENST00000564582 DNAJC9Q8WXX5 260 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 CTNNBL1Q8WYA6 563 aaPredicted RBP5.93□□□□□ -1.46
CHD9-210ENST00000564582 NCSTNQ92542 709 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 GCDHQ92947 438 aaPredicted RBP5.93□□□□□ -1.46
CHD9-210ENST00000564582 ZNF653Q96CK0 615 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 TLCD1Q96CP7 247 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 NEIL1Q96FI4 390 aaPredicted RBP5.93□□□□□ -1.46
CHD9-210ENST00000564582 ZNF496Q96IT1 587 aaPredicted RBP5.93□□□□□ -1.46
CHD9-210ENST00000564582 TCEANC2Q96MN5 208 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 WDR92Q96MX6 357 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 LRRC37BQ96QE4 947 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 TIPINQ9BVW5 301 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 FTOQ9C0B1 505 aaKnown RBP eCLIP5.93□□□□□ -1.46
CHD9-210ENST00000564582 YIPF3Q9GZM5 350 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 CCDC8Q9H0W5 538 aaPredicted RBP5.93□□□□□ -1.46
CHD9-210ENST00000564582 MMADHCQ9H3L0 296 aaPredicted RBP5.93□□□□□ -1.46
CHD9-210ENST00000564582 RNF41Q9H4P4 317 aaPredicted RBP5.93□□□□□ -1.46
CHD9-210ENST00000564582 KCNMB3Q9NPA1 279 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 DDX21Q9NR30 783 aaKnown RBP eCLIP5.93□□□□□ -1.46
CHD9-210ENST00000564582 TBCCD1Q9NVR7 557 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 PPP4R1LQ9P1A2 415 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 HDAC9Q9UKV0 1011 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 NFU1Q9UMS0 254 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 MROH7-TTC4A0A0A0MT08 1334 aa5.93□□□□□ -1.46
CHD9-210ENST00000564582 C3P01024 1663 aa5.92□□□□□ -1.46
CHD9-210ENST00000564582 A0A0A6YYK5 440 aaPredicted RBP5.92□□□□□ -1.46
CHD9-210ENST00000564582 KRTAP4-8A0A0G2JLE6 195 aa5.92□□□□□ -1.46
CHD9-210ENST00000564582 A8MXQ7 604 aa5.92□□□□□ -1.46
CHD9-210ENST00000564582 TRAFD1O14545 582 aaPredicted RBP5.92□□□□□ -1.46
CHD9-210ENST00000564582 RGS16O15492 202 aaPredicted RBP5.92□□□□□ -1.46
CHD9-210ENST00000564582 ZSCAN9O15535 394 aaPredicted RBP5.92□□□□□ -1.46
CHD9-210ENST00000564582 ECE2O60344 883 aa5.92□□□□□ -1.46
CHD9-210ENST00000564582 NRP2O60462 931 aa5.92□□□□□ -1.46
CHD9-210ENST00000564582 SNX3O60493 162 aa5.92□□□□□ -1.46
CHD9-210ENST00000564582 GAS8O95995 478 aa5.92□□□□□ -1.46
CHD9-210ENST00000564582 GNAT2P19087 354 aa5.92□□□□□ -1.46
CHD9-210ENST00000564582 XPAP23025 273 aaPredicted RBP5.92□□□□□ -1.46
CHD9-210ENST00000564582 HPDP32754 393 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms